Felline A - Search Results

1

A Mixed Protein Structure Network and Elastic Network Model Approach to Predict the Structural Communication in Biomolecular Systems: The PDZ2 Domain from Tyrosine Phosphatase 1E As a Case Study.

Raimondi F, Felline A, Seeber M, Mariani S, Fanelli F. Raimondi F, et al. Among authors: felline a. J Chem Theory Comput. 2013 May 14;9(5):2504-18. doi: 10.1021/ct400096f. Epub 2013 Apr 26. J Chem Theory Comput. 2013. PMID: 26583738

2

Dimerization and ligand binding affect the structure network of A(2A) adenosine receptor.

Fanelli F, Felline A. Fanelli F, et al. Among authors: felline a. Biochim Biophys Acta. 2011 May;1808(5):1256-66. doi: 10.1016/j.bbamem.2010.08.006. Epub 2010 Aug 14. Biochim Biophys Acta. 2011. PMID: 20713020 Free article. Review.

3

Conserved amino acids participate in the structure networks deputed to intramolecular communication in the lutropin receptor.

Angelova K, Felline A, Lee M, Patel M, Puett D, Fanelli F. Angelova K, et al. Among authors: felline a. Cell Mol Life Sci. 2011 Apr;68(7):1227-39. doi: 10.1007/s00018-010-0519-z. Epub 2010 Sep 11. Cell Mol Life Sci. 2011. PMID: 20835841 Free PMC article.

4

Wordom: a user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces.

Seeber M, Felline A, Raimondi F, Muff S, Friedman R, Rao F, Caflisch A, Fanelli F. Seeber M, et al. Among authors: felline a. J Comput Chem. 2011 Apr 30;32(6):1183-94. doi: 10.1002/jcc.21688. Epub 2010 Nov 29. J Comput Chem. 2011. PMID: 21387345 Free PMC article.

5

Light on the structural communication in Ras GTPases.

Raimondi F, Felline A, Portella G, Orozco M, Fanelli F. Raimondi F, et al. Among authors: felline a. J Biomol Struct Dyn. 2013;31(2):142-57. doi: 10.1080/07391102.2012.698379. Epub 2012 Aug 1. J Biomol Struct Dyn. 2013. PMID: 22849539

6

Quaternary structure predictions and structural communication features of GPCR dimers.

Fanelli F, Seeber M, Felline A, Casciari D, Raimondi F. Fanelli F, et al. Among authors: felline a. Prog Mol Biol Transl Sci. 2013;117:105-42. doi: 10.1016/B978-0-12-386931-9.00005-2. Prog Mol Biol Transl Sci. 2013. PMID: 23663967 Review.

7

Network and atomistic simulations unveil the structural determinants of mutations linked to retinal diseases.

Mariani S, Dell'Orco D, Felline A, Raimondi F, Fanelli F. Mariani S, et al. Among authors: felline a. PLoS Comput Biol. 2013;9(8):e1003207. doi: 10.1371/journal.pcbi.1003207. Epub 2013 Aug 29. PLoS Comput Biol. 2013. PMID: 24009494 Free PMC article.

8

Network analysis to uncover the structural communication in GPCRs.

Fanelli F, Felline A, Raimondi F. Fanelli F, et al. Among authors: felline a. Methods Cell Biol. 2013;117:43-61. doi: 10.1016/B978-0-12-408143-7.00003-7. Methods Cell Biol. 2013. PMID: 24143971

9

WebPSN: a web server for high-throughput investigation of structural communication in biomacromolecules.

Seeber M, Felline A, Raimondi F, Mariani S, Fanelli F. Seeber M, et al. Among authors: felline a. Bioinformatics. 2015 Mar 1;31(5):779-81. doi: 10.1093/bioinformatics/btu718. Epub 2014 Oct 28. Bioinformatics. 2015. PMID: 25355786

10

Catching Functional Modes and Structural Communication in Dbl Family Rho Guanine Nucleotide Exchange Factors.

Raimondi F, Felline A, Fanelli F. Raimondi F, et al. Among authors: felline a. J Chem Inf Model. 2015 Sep 28;55(9):1878-93. doi: 10.1021/acs.jcim.5b00122. Epub 2015 Sep 14. J Chem Inf Model. 2015. PMID: 26322553

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