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EHDViz: clinical dashboard development using open-source technologies.
Badgeley MA, Shameer K, Glicksberg BS, Tomlinson MS, Levin MA, McCormick PJ, Kasarskis A, Reich DL, Dudley JT. Badgeley MA, et al. Among authors: kasarskis a. BMJ Open. 2016 Mar 24;6(3):e010579. doi: 10.1136/bmjopen-2015-010579. BMJ Open. 2016. PMID: 27013597 Free PMC article.
Pharmacological risk factors associated with hospital readmission rates in a psychiatric cohort identified using prescriptome data mining.
Shameer K, Perez-Rodriguez MM, Bachar R, Li L, Johnson A, Johnson KW, Glicksberg BS, Smith MR, Readhead B, Scarpa J, Jebakaran J, Kovatch P, Lim S, Goodman W, Reich DL, Kasarskis A, Tatonetti NP, Dudley JT. Shameer K, et al. Among authors: kasarskis a. BMC Med Inform Decis Mak. 2018 Sep 14;18(Suppl 3):79. doi: 10.1186/s12911-018-0653-3. BMC Med Inform Decis Mak. 2018. PMID: 30255805 Free PMC article.
Machine Learning to Predict Mortality and Critical Events in a Cohort of Patients With COVID-19 in New York City: Model Development and Validation.
Vaid A, Somani S, Russak AJ, De Freitas JK, Chaudhry FF, Paranjpe I, Johnson KW, Lee SJ, Miotto R, Richter F, Zhao S, Beckmann ND, Naik N, Kia A, Timsina P, Lala A, Paranjpe M, Golden E, Danieletto M, Singh M, Meyer D, O'Reilly PF, Huckins L, Kovatch P, Finkelstein J, Freeman RM, Argulian E, Kasarskis A, Percha B, Aberg JA, Bagiella E, Horowitz CR, Murphy B, Nestler EJ, Schadt EE, Cho JH, Cordon-Cardo C, Fuster V, Charney DS, Reich DL, Bottinger EP, Levin MA, Narula J, Fayad ZA, Just AC, Charney AW, Nadkarni GN, Glicksberg BS. Vaid A, et al. Among authors: kasarskis a. J Med Internet Res. 2020 Nov 6;22(11):e24018. doi: 10.2196/24018. J Med Internet Res. 2020. PMID: 33027032 Free PMC article.
Development and clinical application of an integrative genomic approach to personalized cancer therapy.
Uzilov AV, Ding W, Fink MY, Antipin Y, Brohl AS, Davis C, Lau CY, Pandya C, Shah H, Kasai Y, Powell J, Micchelli M, Castellanos R, Zhang Z, Linderman M, Kinoshita Y, Zweig M, Raustad K, Cheung K, Castillo D, Wooten M, Bourzgui I, Newman LC, Deikus G, Mathew B, Zhu J, Glicksberg BS, Moe AS, Liao J, Edelmann L, Dudley JT, Maki RG, Kasarskis A, Holcombe RF, Mahajan M, Hao K, Reva B, Longtine J, Starcevic D, Sebra R, Donovan MJ, Li S, Schadt EE, Chen R. Uzilov AV, et al. Among authors: kasarskis a. Genome Med. 2016 Jun 1;8(1):62. doi: 10.1186/s13073-016-0313-0. Genome Med. 2016. PMID: 27245685 Free PMC article.
PREDICTIVE MODELING OF HOSPITAL READMISSION RATES USING ELECTRONIC MEDICAL RECORD-WIDE MACHINE LEARNING: A CASE-STUDY USING MOUNT SINAI HEART FAILURE COHORT.
Shameer K, Johnson KW, Yahi A, Miotto R, Li LI, Ricks D, Jebakaran J, Kovatch P, Sengupta PP, Gelijns S, Moskovitz A, Darrow B, David DL, Kasarskis A, Tatonetti NP, Pinney S, Dudley JT. Shameer K, et al. Among authors: kasarskis a. Pac Symp Biocomput. 2017;22:276-287. doi: 10.1142/9789813207813_0027. Pac Symp Biocomput. 2017. PMID: 27896982 Free PMC article.
Outcomes of Patients on Maintenance Dialysis Hospitalized with COVID-19.
Chan L, Jaladanki SK, Somani S, Paranjpe I, Kumar A, Zhao S, Kaufman L, Leisman S, Sharma S, He JC, Murphy B, Fayad ZA, Levin MA, Bottinger EP, Charney AW, Glicksberg BS, Coca SG, Nadkarni GN; Mount Sinai COVID Informatics Center (MSCIC). Chan L, et al. Clin J Am Soc Nephrol. 2021 Mar 8;16(3):452-455. doi: 10.2215/CJN.12360720. Epub 2020 Oct 30. Clin J Am Soc Nephrol. 2021. PMID: 33127607 Free PMC article. No abstract available.
Predictive Approaches for Acute Dialysis Requirement and Death in COVID-19.
Vaid A, Chan L, Chaudhary K, Jaladanki SK, Paranjpe I, Russak A, Kia A, Timsina P, Levin MA, He JC, Böttinger EP, Charney AW, Fayad ZA, Coca SG, Glicksberg BS, Nadkarni GN; MSCIC. Vaid A, et al. Clin J Am Soc Nephrol. 2021 Aug;16(8):1158-1168. doi: 10.2215/CJN.17311120. Epub 2021 May 24. Clin J Am Soc Nephrol. 2021. PMID: 34031183 Free PMC article.
Systems Genetic Analyses Highlight a TGFβ-FOXO3 Dependent Striatal Astrocyte Network Conserved across Species and Associated with Stress, Sleep, and Huntington's Disease.
Scarpa JR, Jiang P, Losic B, Readhead B, Gao VD, Dudley JT, Vitaterna MH, Turek FW, Kasarskis A. Scarpa JR, et al. Among authors: kasarskis a. PLoS Genet. 2016 Jul 8;12(7):e1006137. doi: 10.1371/journal.pgen.1006137. eCollection 2016 Jul. PLoS Genet. 2016. PMID: 27390852 Free PMC article.
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