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Probabilistic pathway-based multimodal factor analysis.
Immer A, Stark SG, Jacob F, Bonilla X, Thomas T, Kahles A, Goetze S, Milani ES, Wollscheid B; Tumor Profiler Consortium; Rätsch G, Lehmann KV. Immer A, et al. Bioinformatics. 2024 Jun 28;40(Suppl 1):i189-i198. doi: 10.1093/bioinformatics/btae216. Bioinformatics. 2024. PMID: 38940152 Free PMC article.
scROSHI: robust supervised hierarchical identification of single cells.
Prummer M, Bertolini A, Bosshard L, Barkmann F, Yates J, Boeva V; Tumor Profiler Consortium; Stekhoven D, Singer F. Prummer M, et al. NAR Genom Bioinform. 2023 Jun 16;5(2):lqad058. doi: 10.1093/nargab/lqad058. eCollection 2023 Jun. NAR Genom Bioinform. 2023. PMID: 37332656 Free PMC article.
A practical guide to multiplexed mass cytometry.
Zivanovic N, Jacobs A, Bodenmiller B. Zivanovic N, et al. Among authors: bodenmiller b. Curr Top Microbiol Immunol. 2014;377:95-109. doi: 10.1007/82_2013_335. Curr Top Microbiol Immunol. 2014. PMID: 23918170
Automatic single cell segmentation on highly multiplexed tissue images.
Schüffler PJ, Schapiro D, Giesen C, Wang HA, Bodenmiller B, Buhmann JM. Schüffler PJ, et al. Among authors: bodenmiller b. Cytometry A. 2015 Oct;87(10):936-42. doi: 10.1002/cyto.a.22702. Epub 2015 Jul 2. Cytometry A. 2015. PMID: 26147066 Free article.
Kinome-wide decoding of network-attacking mutations rewiring cancer signaling.
Creixell P, Schoof EM, Simpson CD, Longden J, Miller CJ, Lou HJ, Perryman L, Cox TR, Zivanovic N, Palmeri A, Wesolowska-Andersen A, Helmer-Citterich M, Ferkinghoff-Borg J, Itamochi H, Bodenmiller B, Erler JT, Turk BE, Linding R. Creixell P, et al. Among authors: bodenmiller b. Cell. 2015 Sep 24;163(1):202-17. doi: 10.1016/j.cell.2015.08.056. Epub 2015 Sep 17. Cell. 2015. PMID: 26388441 Free PMC article.
129 results