Huang DS - Search Results

1

ILNCSIM: improved lncRNA functional similarity calculation model.

Huang YA, Chen X, You ZH, Huang DS, Chan KC. Huang YA, et al. Among authors: huang ds. Oncotarget. 2016 May 3;7(18):25902-14. doi: 10.18632/oncotarget.8296. Oncotarget. 2016. PMID: 27028993 Free PMC article.

2

A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties of functional gene network.

You ZH, Yin Z, Han K, Huang DS, Zhou X. You ZH, et al. Among authors: huang ds. BMC Bioinformatics. 2010 Jun 24;11:343. doi: 10.1186/1471-2105-11-343. BMC Bioinformatics. 2010. PMID: 20573270 Free PMC article.

3

Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data.

You ZH, Lei YK, Gui J, Huang DS, Zhou X. You ZH, et al. Among authors: huang ds. Bioinformatics. 2010 Nov 1;26(21):2744-51. doi: 10.1093/bioinformatics/btq510. Epub 2010 Sep 3. Bioinformatics. 2010. PMID: 20817744 Free PMC article.

4

Assessing and predicting protein interactions by combining manifold embedding with multiple information integration.

Lei YK, You ZH, Ji Z, Zhu L, Huang DS. Lei YK, et al. Among authors: huang ds. BMC Bioinformatics. 2012 May 8;13 Suppl 7(Suppl 7):S3. doi: 10.1186/1471-2105-13-S7-S3. BMC Bioinformatics. 2012. PMID: 22595000 Free PMC article.

5

t-LSE: a novel robust geometric approach for modeling protein-protein interaction networks.

Zhu L, You ZH, Huang DS, Wang B. Zhu L, et al. Among authors: huang ds. PLoS One. 2013;8(4):e58368. doi: 10.1371/journal.pone.0058368. Epub 2013 Apr 1. PLoS One. 2013. PMID: 23560036 Free PMC article.

6

Identification of self-interacting proteins by exploring evolutionary information embedded in PSI-BLAST-constructed position specific scoring matrix.

An JY, You ZH, Chen X, Huang DS, Li ZW, Liu G, Wang Y. An JY, et al. Among authors: huang ds. Oncotarget. 2016 Dec 13;7(50):82440-82449. doi: 10.18632/oncotarget.12517. Oncotarget. 2016. PMID: 27732957 Free PMC article.

7

Robust and accurate prediction of protein self-interactions from amino acids sequence using evolutionary information.

An JY, You ZH, Chen X, Huang DS, Yan G, Wang DF. An JY, et al. Among authors: huang ds. Mol Biosyst. 2016 Nov 15;12(12):3702-3710. doi: 10.1039/c6mb00599c. Mol Biosyst. 2016. PMID: 27759121

8

Identifying Spurious Interactions in the Protein-Protein Interaction Networks Using Local Similarity Preserving Embedding.

Zhu L, Deng SP, You ZH, Huang DS. Zhu L, et al. Among authors: huang ds. IEEE/ACM Trans Comput Biol Bioinform. 2017 Mar-Apr;14(2):345-352. doi: 10.1109/TCBB.2015.2407393. IEEE/ACM Trans Comput Biol Bioinform. 2017. PMID: 28368812

9

Accurate prediction of protein-protein interactions by integrating potential evolutionary information embedded in PSSM profile and discriminative vector machine classifier.

Li ZW, You ZH, Chen X, Li LP, Huang DS, Yan GY, Nie R, Huang YA. Li ZW, et al. Among authors: huang ds, huang ya. Oncotarget. 2017 Apr 4;8(14):23638-23649. doi: 10.18632/oncotarget.15564. Oncotarget. 2017. PMID: 28423569 Free PMC article.

10

A novel computational model based on super-disease and miRNA for potential miRNA-disease association prediction.

Chen X, Jiang ZC, Xie D, Huang DS, Zhao Q, Yan GY, You ZH. Chen X, et al. Among authors: huang ds. Mol Biosyst. 2017 May 30;13(6):1202-1212. doi: 10.1039/c6mb00853d. Mol Biosyst. 2017. PMID: 28470244

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