Song Y - Search Results

1

Cold-Adapted Viral Attenuation (CAVA): Highly Temperature Sensitive Polioviruses as Novel Vaccine Strains for a Next Generation Inactivated Poliovirus Vaccine.

Sanders BP, de Los Rios Oakes I, van Hoek V, Bockstal V, Kamphuis T, Uil TG, Song Y, Cooper G, Crawt LE, Martín J, Zahn R, Lewis J, Wimmer E, Custers JH, Schuitemaker H, Cello J, Edo-Matas D. Sanders BP, et al. Among authors: song y. PLoS Pathog. 2016 Mar 31;12(3):e1005483. doi: 10.1371/journal.ppat.1005483. eCollection 2016 Mar. PLoS Pathog. 2016. PMID: 27032093 Free PMC article.

2

Evolution of poliovirus defective interfering particles expressing Gaussia luciferase.

Song Y, Paul AV, Wimmer E. Song Y, et al. J Virol. 2012 Feb;86(4):1999-2010. doi: 10.1128/JVI.05871-11. Epub 2011 Dec 7. J Virol. 2012. PMID: 22156535 Free PMC article.

3

Identification of two functionally redundant RNA elements in the coding sequence of poliovirus using computer-generated design.

Song Y, Liu Y, Ward CB, Mueller S, Futcher B, Skiena S, Paul AV, Wimmer E. Song Y, et al. Proc Natl Acad Sci U S A. 2012 Sep 4;109(36):14301-7. doi: 10.1073/pnas.1211484109. Epub 2012 Aug 10. Proc Natl Acad Sci U S A. 2012. PMID: 22886087 Free PMC article.

4

Limits of variation, specific infectivity, and genome packaging of massively recoded poliovirus genomes.

Song Y, Gorbatsevych O, Liu Y, Mugavero J, Shen SH, Ward CB, Asare E, Jiang P, Paul AV, Mueller S, Wimmer E. Song Y, et al. Proc Natl Acad Sci U S A. 2017 Oct 10;114(41):E8731-E8740. doi: 10.1073/pnas.1714385114. Epub 2017 Sep 25. Proc Natl Acad Sci U S A. 2017. PMID: 28973853 Free PMC article.

5

Dengue and Zika Virus 5' Untranslated Regions Harbor Internal Ribosomal Entry Site Functions.

Song Y, Mugavero J, Stauft CB, Wimmer E. Song Y, et al. mBio. 2019 Apr 9;10(2):e00459-19. doi: 10.1128/mBio.00459-19. mBio. 2019. PMID: 30967466 Free PMC article.

6

Large-scale recoding of an arbovirus genome to rebalance its insect versus mammalian preference.

Shen SH, Stauft CB, Gorbatsevych O, Song Y, Ward CB, Yurovsky A, Mueller S, Futcher B, Wimmer E. Shen SH, et al. Among authors: song y. Proc Natl Acad Sci U S A. 2015 Apr 14;112(15):4749-54. doi: 10.1073/pnas.1502864112. Epub 2015 Mar 30. Proc Natl Acad Sci U S A. 2015. PMID: 25825721 Free PMC article.

7

Extensive recoding of dengue virus type 2 specifically reduces replication in primate cells without gain-of-function in Aedes aegypti mosquitoes.

Stauft CB, Shen SH, Song Y, Gorbatsevych O, Asare E, Futcher B, Mueller S, Payne A, Brecher M, Kramer L, Wimmer E. Stauft CB, et al. Among authors: song y. PLoS One. 2018 Sep 7;13(9):e0198303. doi: 10.1371/journal.pone.0198303. eCollection 2018. PLoS One. 2018. PMID: 30192757 Free PMC article.

8

Extensive genomic recoding by codon-pair deoptimization selective for mammals is a flexible tool to generate attenuated vaccine candidates for dengue virus 2.

Stauft CB, Song Y, Gorbatsevych O, Pantoja P, Rodriguez IV, Futcher B, Sariol CA, Wimmer E. Stauft CB, et al. Among authors: song y. Virology. 2019 Nov;537:237-245. doi: 10.1016/j.virol.2019.09.003. Epub 2019 Sep 5. Virology. 2019. PMID: 31539771 Free article.

9

Scalable live-attenuated SARS-CoV-2 vaccine candidate demonstrates preclinical safety and efficacy.

Wang Y, Yang C, Song Y, Coleman JR, Stawowczyk M, Tafrova J, Tasker S, Boltz D, Baker R, Garcia L, Seale O, Kushnir A, Wimmer E, Mueller S. Wang Y, et al. Among authors: song y. Proc Natl Acad Sci U S A. 2021 Jul 20;118(29):e2102775118. doi: 10.1073/pnas.2102775118. Proc Natl Acad Sci U S A. 2021. PMID: 34193524 Free PMC article.

10

Reply to Simmonds et al.: Codon pair and dinucleotide bias have not been functionally distinguished.

Futcher B, Gorbatsevych O, Shen SH, Stauft CB, Song Y, Wang B, Leatherwood J, Gardin J, Yurovsky A, Mueller S, Wimmer E. Futcher B, et al. Among authors: song y. Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):E3635-6. doi: 10.1073/pnas.1507710112. Epub 2015 Jun 12. Proc Natl Acad Sci U S A. 2015. PMID: 26071446 Free PMC article. No abstract available.

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