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AgIn: measuring the landscape of CpG methylation of individual repetitive elements.
Suzuki Y, Korlach J, Turner SW, Tsukahara T, Taniguchi J, Qu W, Ichikawa K, Yoshimura J, Yurino H, Takahashi Y, Mitsui J, Ishiura H, Tsuji S, Takeda H, Morishita S. Suzuki Y, et al. Among authors: tsukahara t. Bioinformatics. 2016 Oct 1;32(19):2911-9. doi: 10.1093/bioinformatics/btw360. Epub 2016 Jun 17. Bioinformatics. 2016. PMID: 27318202 Free PMC article.
CTCF looping is established during gastrulation in medaka embryos.
Nakamura R, Motai Y, Kumagai M, Wike CL, Nishiyama H, Nakatani Y, Durand NC, Kondo K, Kondo T, Tsukahara T, Shimada A, Cairns BR, Aiden EL, Morishita S, Takeda H. Nakamura R, et al. Among authors: tsukahara t. Genome Res. 2021 Jun;31(6):968-980. doi: 10.1101/gr.269951.120. Epub 2021 May 18. Genome Res. 2021. PMID: 34006570 Free PMC article.
Analysis of a novel gene, Sdgc, reveals sex chromosome-dependent differences of medaka germ cells prior to gonad formation.
Nishimura T, Herpin A, Kimura T, Hara I, Kawasaki T, Nakamura S, Yamamoto Y, Saito TL, Yoshimura J, Morishita S, Tsukahara T, Kobayashi S, Naruse K, Shigenobu S, Sakai N, Schartl M, Tanaka M. Nishimura T, et al. Among authors: tsukahara t. Development. 2014 Sep;141(17):3363-9. doi: 10.1242/dev.106864. Epub 2014 Jul 30. Development. 2014. PMID: 25078651
The medaka zic1/zic4 mutant provides molecular insights into teleost caudal fin evolution.
Moriyama Y, Kawanishi T, Nakamura R, Tsukahara T, Sumiyama K, Suster ML, Kawakami K, Toyoda A, Fujiyama A, Yasuoka Y, Nagao Y, Sawatari E, Shimizu A, Wakamatsu Y, Hibi M, Taira M, Okabe M, Naruse K, Hashimoto H, Shimada A, Takeda H. Moriyama Y, et al. Among authors: tsukahara t. Curr Biol. 2012 Apr 10;22(7):601-7. doi: 10.1016/j.cub.2012.01.063. Epub 2012 Mar 1. Curr Biol. 2012. PMID: 22386310 Free article.
895 results