Nelson KE - Search Results

1

Microbial diversity in individuals and their household contacts following typical antibiotic courses.

Abeles SR, Jones MB, Santiago-Rodriguez TM, Ly M, Klitgord N, Yooseph S, Nelson KE, Pride DT. Abeles SR, et al. Among authors: nelson ke. Microbiome. 2016 Jul 30;4(1):39. doi: 10.1186/s40168-016-0187-9. Microbiome. 2016. PMID: 27473422 Free PMC article.

2

Bacterial diversity in the oral cavity of 10 healthy individuals.

Bik EM, Long CD, Armitage GC, Loomer P, Emerson J, Mongodin EF, Nelson KE, Gill SR, Fraser-Liggett CM, Relman DA. Bik EM, et al. Among authors: nelson ke. ISME J. 2010 Aug;4(8):962-74. doi: 10.1038/ismej.2010.30. Epub 2010 Mar 25. ISME J. 2010. PMID: 20336157 Free PMC article.

3

Structure, function and diversity of the healthy human microbiome.

Human Microbiome Project Consortium. Human Microbiome Project Consortium. Nature. 2012 Jun 13;486(7402):207-14. doi: 10.1038/nature11234. Nature. 2012. PMID: 22699609 Free PMC article.

4

Microbiome analysis of stool samples from African Americans with colon polyps.

Brim H, Yooseph S, Zoetendal EG, Lee E, Torralbo M, Laiyemo AO, Shokrani B, Nelson K, Ashktorab H. Brim H, et al. PLoS One. 2013 Dec 20;8(12):e81352. doi: 10.1371/journal.pone.0081352. eCollection 2013. PLoS One. 2013. PMID: 24376500 Free PMC article.

5

An in vitro biofilm model system maintaining a highly reproducible species and metabolic diversity approaching that of the human oral microbiome.

Edlund A, Yang Y, Hall AP, Guo L, Lux R, He X, Nelson KE, Nealson KH, Yooseph S, Shi W, McLean JS. Edlund A, et al. Among authors: nelson ke. Microbiome. 2013 Oct 2;1(1):25. doi: 10.1186/2049-2618-1-25. Microbiome. 2013. PMID: 24451062 Free PMC article.

6

Cultivation of a human-associated TM7 phylotype reveals a reduced genome and epibiotic parasitic lifestyle.

He X, McLean JS, Edlund A, Yooseph S, Hall AP, Liu SY, Dorrestein PC, Esquenazi E, Hunter RC, Cheng G, Nelson KE, Lux R, Shi W. He X, et al. Among authors: nelson ke. Proc Natl Acad Sci U S A. 2015 Jan 6;112(1):244-9. doi: 10.1073/pnas.1419038112. Epub 2014 Dec 22. Proc Natl Acad Sci U S A. 2015. PMID: 25535390 Free PMC article.

7

Meta-omics uncover temporal regulation of pathways across oral microbiome genera during in vitro sugar metabolism.

Edlund A, Yang Y, Yooseph S, Hall AP, Nguyen DD, Dorrestein PC, Nelson KE, He X, Lux R, Shi W, McLean JS. Edlund A, et al. Among authors: nelson ke. ISME J. 2015 Dec;9(12):2605-19. doi: 10.1038/ismej.2015.72. Epub 2015 May 29. ISME J. 2015. PMID: 26023872 Free PMC article.

8

Stool microbiota composition is associated with the prospective risk of Plasmodium falciparum infection.

Yooseph S, Kirkness EF, Tran TM, Harkins DM, Jones MB, Torralba MG, O'Connell E, Nutman TB, Doumbo S, Doumbo OK, Traore B, Crompton PD, Nelson KE. Yooseph S, et al. Among authors: nelson ke. BMC Genomics. 2015 Aug 22;16(1):631. doi: 10.1186/s12864-015-1819-3. BMC Genomics. 2015. PMID: 26296559 Free PMC article.

9

Library preparation methodology can influence genomic and functional predictions in human microbiome research.

Jones MB, Highlander SK, Anderson EL, Li W, Dayrit M, Klitgord N, Fabani MM, Seguritan V, Green J, Pride DT, Yooseph S, Biggs W, Nelson KE, Venter JC. Jones MB, et al. Among authors: nelson ke. Proc Natl Acad Sci U S A. 2015 Nov 10;112(45):14024-9. doi: 10.1073/pnas.1519288112. Epub 2015 Oct 28. Proc Natl Acad Sci U S A. 2015. PMID: 26512100 Free PMC article.

10

Variable responses of human and non-human primate gut microbiomes to a Western diet.

Amato KR, Yeoman CJ, Cerda G, Schmitt CA, Cramer JD, Miller ME, Gomez A, Turner TR, Wilson BA, Stumpf RM, Nelson KE, White BA, Knight R, Leigh SR. Amato KR, et al. Among authors: nelson ke. Microbiome. 2015 Nov 16;3:53. doi: 10.1186/s40168-015-0120-7. Microbiome. 2015. PMID: 26568112 Free PMC article.

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