Troyanskaya OG - Search Results

1

Genome-wide prediction and functional characterization of the genetic basis of autism spectrum disorder.

Krishnan A, Zhang R, Yao V, Theesfeld CL, Wong AK, Tadych A, Volfovsky N, Packer A, Lash A, Troyanskaya OG. Krishnan A, et al. Among authors: troyanskaya og. Nat Neurosci. 2016 Nov;19(11):1454-1462. doi: 10.1038/nn.4353. Epub 2016 Aug 1. Nat Neurosci. 2016. PMID: 27479844 Free PMC article.

2

Discovery of biological networks from diverse functional genomic data.

Myers CL, Robson D, Wible A, Hibbs MA, Chiriac C, Theesfeld CL, Dolinski K, Troyanskaya OG. Myers CL, et al. Among authors: troyanskaya og. Genome Biol. 2005;6(13):R114. doi: 10.1186/gb-2005-6-13-r114. Epub 2005 Dec 19. Genome Biol. 2005. PMID: 16420673 Free PMC article.

3

Exploring the human genome with functional maps.

Huttenhower C, Haley EM, Hibbs MA, Dumeaux V, Barrett DR, Coller HA, Troyanskaya OG. Huttenhower C, et al. Among authors: troyanskaya og. Genome Res. 2009 Jun;19(6):1093-106. doi: 10.1101/gr.082214.108. Epub 2009 Feb 26. Genome Res. 2009. PMID: 19246570 Free PMC article.

4

Simultaneous genome-wide inference of physical, genetic, regulatory, and functional pathway components.

Park CY, Hess DC, Huttenhower C, Troyanskaya OG. Park CY, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2010 Nov 24;6(11):e1001009. doi: 10.1371/journal.pcbi.1001009. PLoS Comput Biol. 2010. PMID: 21124865 Free PMC article.

5

Nucleosome-coupled expression differences in closely-related species.

Guan Y, Yao V, Tsui K, Gebbia M, Dunham MJ, Nislow C, Troyanskaya OG. Guan Y, et al. Among authors: troyanskaya og. BMC Genomics. 2011 Sep 26;12:466. doi: 10.1186/1471-2164-12-466. BMC Genomics. 2011. PMID: 21942931 Free PMC article.

6

IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks.

Wong AK, Park CY, Greene CS, Bongo LA, Guan Y, Troyanskaya OG. Wong AK, et al. Among authors: troyanskaya og. Nucleic Acids Res. 2012 Jul;40(Web Server issue):W484-90. doi: 10.1093/nar/gks458. Epub 2012 Jun 7. Nucleic Acids Res. 2012. PMID: 22684505 Free PMC article.

7

Tissue-specific functional networks for prioritizing phenotype and disease genes.

Guan Y, Gorenshteyn D, Burmeister M, Wong AK, Schimenti JC, Handel MA, Bult CJ, Hibbs MA, Troyanskaya OG. Guan Y, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2012;8(9):e1002694. doi: 10.1371/journal.pcbi.1002694. Epub 2012 Sep 27. PLoS Comput Biol. 2012. PMID: 23028291 Free PMC article.

8

Functional knowledge transfer for high-accuracy prediction of under-studied biological processes.

Park CY, Wong AK, Greene CS, Rowland J, Guan Y, Bongo LA, Burdine RD, Troyanskaya OG. Park CY, et al. Among authors: troyanskaya og. PLoS Comput Biol. 2013;9(3):e1002957. doi: 10.1371/journal.pcbi.1002957. Epub 2013 Mar 14. PLoS Comput Biol. 2013. PMID: 23516347 Free PMC article.

9

Ontology-aware classification of tissue and cell-type signals in gene expression profiles across platforms and technologies.

Lee YS, Krishnan A, Zhu Q, Troyanskaya OG. Lee YS, et al. Among authors: troyanskaya og. Bioinformatics. 2013 Dec 1;29(23):3036-44. doi: 10.1093/bioinformatics/btt529. Epub 2013 Sep 12. Bioinformatics. 2013. PMID: 24037214 Free PMC article.

10

A community computational challenge to predict the activity of pairs of compounds.

Bansal M, Yang J, Karan C, Menden MP, Costello JC, Tang H, Xiao G, Li Y, Allen J, Zhong R, Chen B, Kim M, Wang T, Heiser LM, Realubit R, Mattioli M, Alvarez MJ, Shen Y; NCI-DREAM Community; Gallahan D, Singer D, Saez-Rodriguez J, Xie Y, Stolovitzky G, Califano A; NCI-DREAM Community. Bansal M, et al. Nat Biotechnol. 2014 Dec;32(12):1213-22. doi: 10.1038/nbt.3052. Epub 2014 Nov 17. Nat Biotechnol. 2014. PMID: 25419740 Free PMC article.

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