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Page 1
Determining crystal structures through crowdsourcing and coursework.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, Flatten J, Rogawski DS, Koropatkin NM, Hailu TT, Jain N, Koldewey P, Ahlstrom LS, Chapman MR, Sikkema AP, Skiba MA, Maloney FP, Beinlich FR; Foldit Players; University of Michigan students; Popović Z, Baker D, Khatib F, Bardwell JC. Horowitz S, et al. Among authors: koropatkin nm. Nat Commun. 2016 Sep 16;7:12549. doi: 10.1038/ncomms12549. Nat Commun. 2016. PMID: 27633552 Free PMC article.
Corrigendum: Determining crystal structures through crowdsourcing and coursework.
Horowitz S, Koepnick B, Martin R, Tymieniecki A, Winburn AA, Cooper S, Flatten J, Rogawski DS, Koropatkin NM, Hailu TT, Jain N, Koldewey P, Ahlstrom LS, Chapman MR, Sikkema AP, Skiba MA, Maloney FP, Beinlich FR; Foldit Players; University of Michigan students; Popović Z, Baker D, Khatib F, Bardwell JC. Horowitz S, et al. Among authors: koropatkin nm. Nat Commun. 2016 Oct 25;7:13392. doi: 10.1038/ncomms13392. Nat Commun. 2016. PMID: 27779204 Free PMC article. No abstract available.
A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes.
Larsbrink J, Rogers TE, Hemsworth GR, McKee LS, Tauzin AS, Spadiut O, Klinter S, Pudlo NA, Urs K, Koropatkin NM, Creagh AL, Haynes CA, Kelly AG, Cederholm SN, Davies GJ, Martens EC, Brumer H. Larsbrink J, et al. Among authors: koropatkin nm. Nature. 2014 Feb 27;506(7489):498-502. doi: 10.1038/nature12907. Epub 2014 Jan 19. Nature. 2014. PMID: 24463512 Free PMC article.
Degradation of complex arabinoxylans by human colonic Bacteroidetes.
Pereira GV, Abdel-Hamid AM, Dutta S, D'Alessandro-Gabazza CN, Wefers D, Farris JA, Bajaj S, Wawrzak Z, Atomi H, Mackie RI, Gabazza EC, Shukla D, Koropatkin NM, Cann I. Pereira GV, et al. Among authors: koropatkin nm. Nat Commun. 2021 Jan 19;12(1):459. doi: 10.1038/s41467-020-20737-5. Nat Commun. 2021. PMID: 33469030 Free PMC article.
How glycan metabolism shapes the human gut microbiota.
Koropatkin NM, Cameron EA, Martens EC. Koropatkin NM, et al. Nat Rev Microbiol. 2012 Apr 11;10(5):323-35. doi: 10.1038/nrmicro2746. Nat Rev Microbiol. 2012. PMID: 22491358 Free PMC article. Review.
Galactomannan Catabolism Conferred by a Polysaccharide Utilization Locus of Bacteroides ovatus: ENZYME SYNERGY AND CRYSTAL STRUCTURE OF A β-MANNANASE.
Bågenholm V, Reddy SK, Bouraoui H, Morrill J, Kulcinskaja E, Bahr CM, Aurelius O, Rogers T, Xiao Y, Logan DT, Martens EC, Koropatkin NM, Stålbrand H. Bågenholm V, et al. Among authors: koropatkin nm. J Biol Chem. 2017 Jan 6;292(1):229-243. doi: 10.1074/jbc.M116.746438. Epub 2016 Nov 21. J Biol Chem. 2017. PMID: 27872187 Free PMC article.
Starch Digestion by Gut Bacteria: Crowdsourcing for Carbs.
Cerqueira FM, Photenhauer AL, Pollet RM, Brown HA, Koropatkin NM. Cerqueira FM, et al. Among authors: koropatkin nm. Trends Microbiol. 2020 Feb;28(2):95-108. doi: 10.1016/j.tim.2019.09.004. Epub 2019 Oct 14. Trends Microbiol. 2020. PMID: 31624005 Review.
The Ruminococcus bromii amylosome protein Sas6 binds single and double helical α-glucan structures in starch.
Photenhauer AL, Villafuerte-Vega RC, Cerqueira FM, Armbruster KM, Mareček F, Chen T, Wawrzak Z, Hopkins JB, Vander Kooi CW, Janeček Š, Ruotolo BT, Koropatkin NM. Photenhauer AL, et al. Among authors: koropatkin nm. Nat Struct Mol Biol. 2024 Feb;31(2):255-265. doi: 10.1038/s41594-023-01166-6. Epub 2024 Jan 4. Nat Struct Mol Biol. 2024. PMID: 38177679 Free PMC article.
71 results