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204 results

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Page 1
Application of Long Sequence Reads To Improve Genomes for Clostridium thermocellum AD2, Clostridium thermocellum LQRI, and Pelosinus fermentans R7.
Utturkar SM, Bayer EA, Borovok I, Lamed R, Hurt RA, Land ML, Klingeman DM, Elias D, Zhou J, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy TB, Ngan CY, Daum C, Shapiro N, Markowitz V, Ivanova N, Kyrpides N, Woyke T, Brown SD. Utturkar SM, et al. Among authors: huntemann m. Genome Announc. 2016 Sep 29;4(5):e01043-16. doi: 10.1128/genomeA.01043-16. Genome Announc. 2016. PMID: 27688341 Free PMC article.
Symbiosis insights through metagenomic analysis of a microbial consortium.
Woyke T, Teeling H, Ivanova NN, Huntemann M, Richter M, Gloeckner FO, Boffelli D, Anderson IJ, Barry KW, Shapiro HJ, Szeto E, Kyrpides NC, Mussmann M, Amann R, Bergin C, Ruehland C, Rubin EM, Dubilier N. Woyke T, et al. Among authors: huntemann m. Nature. 2006 Oct 26;443(7114):950-5. doi: 10.1038/nature05192. Epub 2006 Sep 17. Nature. 2006. PMID: 16980956
Genomes of three methylotrophs from a single niche reveal the genetic and metabolic divergence of the methylophilaceae.
Lapidus A, Clum A, Labutti K, Kaluzhnaya MG, Lim S, Beck DA, Glavina Del Rio T, Nolan M, Mavromatis K, Huntemann M, Lucas S, Lidstrom ME, Ivanova N, Chistoserdova L. Lapidus A, et al. Among authors: huntemann m. J Bacteriol. 2011 Aug;193(15):3757-64. doi: 10.1128/JB.00404-11. Epub 2011 May 27. J Bacteriol. 2011. PMID: 21622745 Free PMC article.
Complete genome sequence of Tsukamurella paurometabola type strain (no. 33).
Munk AC, Lapidus A, Lucas S, Nolan M, Tice H, Cheng JF, Del Rio TG, Goodwin L, Pitluck S, Liolios K, Huntemann M, Ivanova N, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Tapia R, Han C, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Yasawong M, Brambilla EM, Rohde M, Sikorski J, Göker M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Munk AC, et al. Among authors: huntemann m. Stand Genomic Sci. 2011 Jul 1;4(3):342-51. doi: 10.4056/sigs.1894556. Epub 2011 Jun 30. Stand Genomic Sci. 2011. PMID: 21886861 Free PMC article.
Complete genome sequence of Haliscomenobacter hydrossis type strain (O).
Daligault H, Lapidus A, Zeytun A, Nolan M, Lucas S, Del Rio TG, Tice H, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Huntemann M, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Brambilla EM, Rohde M, Verbarg S, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T. Daligault H, et al. Among authors: huntemann m. Stand Genomic Sci. 2011 Jul 1;4(3):352-60. doi: 10.4056/sigs.1964579. Epub 2011 Jun 30. Stand Genomic Sci. 2011. PMID: 21886862 Free PMC article.
IMG/M: the integrated metagenome data management and comparative analysis system.
Markowitz VM, Chen IM, Chu K, Szeto E, Palaniappan K, Grechkin Y, Ratner A, Jacob B, Pati A, Huntemann M, Liolios K, Pagani I, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: huntemann m. Nucleic Acids Res. 2012 Jan;40(Database issue):D123-9. doi: 10.1093/nar/gkr975. Epub 2011 Nov 15. Nucleic Acids Res. 2012. PMID: 22086953 Free PMC article.
Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20).
Pati A, Gronow S, Lu M, Lapidus A, Nolan M, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Mavromatis K, Mikhailova N, Huntemann M, Chen A, Palaniappan K, Land M, Hauser L, Detter JC, Brambilla EM, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Ivanova N. Pati A, et al. Among authors: huntemann m. Stand Genomic Sci. 2011 Oct 15;5(1):41-9. doi: 10.4056/sigs.2164949. Epub 2011 Sep 23. Stand Genomic Sci. 2011. PMID: 22180809 Free PMC article.
IMG: the Integrated Microbial Genomes database and comparative analysis system.
Markowitz VM, Chen IM, Palaniappan K, Chu K, Szeto E, Grechkin Y, Ratner A, Jacob B, Huang J, Williams P, Huntemann M, Anderson I, Mavromatis K, Ivanova NN, Kyrpides NC. Markowitz VM, et al. Among authors: huntemann m. Nucleic Acids Res. 2012 Jan;40(Database issue):D115-22. doi: 10.1093/nar/gkr1044. Nucleic Acids Res. 2012. PMID: 22194640 Free PMC article.
High-quality draft genome sequence of the Opitutaceae bacterium strain TAV1, a symbiont of the wood-feeding termite Reticulitermes flavipes.
Isanapong J, Goodwin L, Bruce D, Chen A, Detter C, Han J, Han CS, Held B, Huntemann M, Ivanova N, Land ML, Mavromatis K, Nolan M, Pati A, Pennacchio L, Pitluck S, Szeto E, Tapia R, Woyke T, Rodrigues JL. Isanapong J, et al. Among authors: huntemann m. J Bacteriol. 2012 May;194(10):2744-5. doi: 10.1128/JB.00264-12. J Bacteriol. 2012. PMID: 22535930 Free PMC article.
Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T)).
Lapidus A, Nolan M, Lucas S, Glavina Del Rio T, Tice H, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Liolios K, Pagani I, Ivanova N, Huntemann M, Mavromatis K, Mikhailova N, Pati A, Chen A, Palaniappan K, Land M, Brambilla EM, Rohde M, Abt B, Verbarg S, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Woyke T. Lapidus A, et al. Among authors: huntemann m. Stand Genomic Sci. 2011 Dec 31;5(3):398-406. doi: 10.4056/sigs.2344929. Epub 2011 Dec 30. Stand Genomic Sci. 2011. PMID: 22675589 Free PMC article.
204 results