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Page 1
Orthology relations, symbolic ultrametrics, and cographs.
Hellmuth M, Hernandez-Rosales M, Huber KT, Moulton V, Stadler PF, Wieseke N. Hellmuth M, et al. Among authors: wieseke n. J Math Biol. 2013 Jan;66(1-2):399-420. doi: 10.1007/s00285-012-0525-x. Epub 2012 Mar 29. J Math Biol. 2013. PMID: 22456957
Orthology detection combining clustering and synteny for very large datasets.
Lechner M, Hernandez-Rosales M, Doerr D, Wieseke N, Thévenin A, Stoye J, Hartmann RK, Prohaska SJ, Stadler PF. Lechner M, et al. Among authors: wieseke n. PLoS One. 2014 Aug 19;9(8):e105015. doi: 10.1371/journal.pone.0105015. eCollection 2014. PLoS One. 2014. PMID: 25137074 Free PMC article.
Phylogenomics with paralogs.
Hellmuth M, Wieseke N, Lechner M, Lenhof HP, Middendorf M, Stadler PF. Hellmuth M, et al. Among authors: wieseke n. Proc Natl Acad Sci U S A. 2015 Feb 17;112(7):2058-63. doi: 10.1073/pnas.1412770112. Epub 2015 Feb 2. Proc Natl Acad Sci U S A. 2015. PMID: 25646426 Free PMC article.
Time-consistent reconciliation maps and forbidden time travel.
Nøjgaard N, Geiß M, Merkle D, Stadler PF, Wieseke N, Hellmuth M. Nøjgaard N, et al. Among authors: wieseke n. Algorithms Mol Biol. 2018 Feb 6;13:2. doi: 10.1186/s13015-018-0121-8. eCollection 2018. Algorithms Mol Biol. 2018. PMID: 29441122 Free PMC article.
Reconstructing gene trees from Fitch's xenology relation.
Geiß M, Anders J, Stadler PF, Wieseke N, Hellmuth M. Geiß M, et al. Among authors: wieseke n. J Math Biol. 2018 Nov;77(5):1459-1491. doi: 10.1007/s00285-018-1260-8. Epub 2018 Jun 27. J Math Biol. 2018. PMID: 29951855
Indirect identification of horizontal gene transfer.
Schaller D, Lafond M, Stadler PF, Wieseke N, Hellmuth M. Schaller D, et al. Among authors: wieseke n. J Math Biol. 2021 Jul 3;83(1):10. doi: 10.1007/s00285-021-01631-0. J Math Biol. 2021. PMID: 34218334 Free PMC article.
Relative timing information and orthology in evolutionary scenarios.
Schaller D, Hartmann T, Lafond M, Stadler PF, Wieseke N, Hellmuth M. Schaller D, et al. Among authors: wieseke n. Algorithms Mol Biol. 2023 Nov 8;18(1):16. doi: 10.1186/s13015-023-00240-4. Algorithms Mol Biol. 2023. PMID: 37940998 Free PMC article.
24 results