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Multi-institute analysis of carbapenem resistance reveals remarkable diversity, unexplained mechanisms, and limited clonal outbreaks.
Cerqueira GC, Earl AM, Ernst CM, Grad YH, Dekker JP, Feldgarden M, Chapman SB, Reis-Cunha JL, Shea TP, Young S, Zeng Q, Delaney ML, Kim D, Peterson EM, O'Brien TF, Ferraro MJ, Hooper DC, Huang SS, Kirby JE, Onderdonk AB, Birren BW, Hung DT, Cosimi LA, Wortman JR, Murphy CI, Hanage WP. Cerqueira GC, et al. Among authors: grad yh. Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):1135-1140. doi: 10.1073/pnas.1616248114. Epub 2017 Jan 17. Proc Natl Acad Sci U S A. 2017. PMID: 28096418 Free PMC article.
Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.
Grad YH, Lipsitch M, Feldgarden M, Arachchi HM, Cerqueira GC, Fitzgerald M, Godfrey P, Haas BJ, Murphy CI, Russ C, Sykes S, Walker BJ, Wortman JR, Young S, Zeng Q, Abouelleil A, Bochicchio J, Chauvin S, Desmet T, Gujja S, McCowan C, Montmayeur A, Steelman S, Frimodt-Møller J, Petersen AM, Struve C, Krogfelt KA, Bingen E, Weill FX, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP. Grad YH, et al. Proc Natl Acad Sci U S A. 2012 Feb 21;109(8):3065-70. doi: 10.1073/pnas.1121491109. Epub 2012 Feb 6. Proc Natl Acad Sci U S A. 2012. PMID: 22315421 Free PMC article.
Bacterial genomes in epidemiology--present and future.
Croucher NJ, Harris SR, Grad YH, Hanage WP. Croucher NJ, et al. Among authors: grad yh. Philos Trans R Soc Lond B Biol Sci. 2013 Feb 4;368(1614):20120202. doi: 10.1098/rstb.2012.0202. Print 2013 Mar 19. Philos Trans R Soc Lond B Biol Sci. 2013. PMID: 23382424 Free PMC article. Review.
Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.
Grad YH, Lipsitch M, Griggs AD, Haas BJ, Shea TP, McCowan C, Montmayeur A, FitzGerald M, Wortman JR, Krogfelt KA, Bingen E, Weill FX, Tietze E, Flieger A, Lander ES, Nusbaum C, Birren BW, Hung DT, Hanage WP. Grad YH, et al. Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):E3629-30. doi: 10.1073/pnas.1209419110. Proc Natl Acad Sci U S A. 2012. PMID: 23479789 Free PMC article. No abstract available.
Weak Epistasis May Drive Adaptation in Recombining Bacteria.
Arnold BJ, Gutmann MU, Grad YH, Sheppard SK, Corander J, Lipsitch M, Hanage WP. Arnold BJ, et al. Among authors: grad yh. Genetics. 2018 Mar;208(3):1247-1260. doi: 10.1534/genetics.117.300662. Epub 2018 Jan 12. Genetics. 2018. PMID: 29330348 Free PMC article.
172 results