Ruan Y - Search Results

1

ASXL1 interacts with the cohesin complex to maintain chromatid separation and gene expression for normal hematopoiesis.

Li Z, Zhang P, Yan A, Guo Z, Ban Y, Li J, Chen S, Yang H, He Y, Li J, Guo Y, Zhang W, Hajiramezanali E, An H, Fajardo D, Harbour JW, Ruan Y, Nimer SD, Yu P, Chen X, Xu M, Yang FC. Li Z, et al. Among authors: ruan y. Sci Adv. 2017 Jan 20;3(1):e1601602. doi: 10.1126/sciadv.1601602. eCollection 2017 Jan. Sci Adv. 2017. PMID: 28116354 Free PMC article.

2

Enhanced performance of gene expression predictive models with protein-mediated spatial chromatin interactions.

Chiliński M, Lipiński J, Agarwal A, Ruan Y, Plewczynski D. Chiliński M, et al. Among authors: ruan y. Sci Rep. 2023 Jul 20;13(1):11693. doi: 10.1038/s41598-023-38865-5. Sci Rep. 2023. PMID: 37474564 Free PMC article.

3

3D-Epigenomic Regulation of Gene Transcription in Hepatocellular Carcinoma.

Feng Y, Wang P, Cai L, Zhan M, He F, Wang J, Li Y, Gega E, Zhang W, Zhao W, Xin Y, Chen X, Ruan Y, Lu L. Feng Y, et al. Among authors: ruan y. Adv Genet (Hoboken). 2022 Jun 29;3(4):2100010. doi: 10.1002/ggn2.202100010. eCollection 2022 Dec. Adv Genet (Hoboken). 2022. PMID: 36911294 Free PMC article.

4

Enhanced performance of gene expression predictive models with protein-mediated spatial chromatin interactions.

Chiliński M, Lipiński J, Agarwal A, Ruan Y, Plewczynski D. Chiliński M, et al. Among authors: ruan y. bioRxiv [Preprint]. 2023 Apr 6:2023.04.06.535849. doi: 10.1101/2023.04.06.535849. bioRxiv. 2023. Update in: Sci Rep. 2023 Jul 20;13(1):11693. doi: 10.1038/s41598-023-38865-5 PMID: 37066361 Free PMC article. Updated. Preprint.

5

Macrophage mediated recognition and clearance of Borrelia burgdorferi elicits MyD88-dependent and -independent phagosomal signals that contribute to phagocytosis and inflammation.

Benjamin SJ, Hawley KL, Vera-Licona P, La Vake CJ, Cervantes JL, Ruan Y, Radolf JD, Salazar JC. Benjamin SJ, et al. Among authors: ruan y. BMC Immunol. 2021 May 17;22(1):32. doi: 10.1186/s12865-021-00418-8. BMC Immunol. 2021. PMID: 34000990 Free PMC article.

6

ChIATAC is an efficient strategy for multi-omics mapping of 3D epigenomes from low-cell inputs.

Chai H, Tjong H, Li P, Liao W, Wang P, Wong CH, Ngan CY, Leonard WJ, Wei CL, Ruan Y. Chai H, et al. Among authors: ruan y. Nat Commun. 2023 Jan 13;14(1):213. doi: 10.1038/s41467-023-35879-5. Nat Commun. 2023. PMID: 36639381 Free PMC article.

7

An expansion of the non-coding genome and its regulatory potential underlies vertebrate neuronal diversity.

Closser M, Guo Y, Wang P, Patel T, Jang S, Hammelman J, De Nooij JC, Kopunova R, Mazzoni EO, Ruan Y, Gifford DK, Wichterle H. Closser M, et al. Among authors: ruan y. Neuron. 2022 Jan 5;110(1):70-85.e6. doi: 10.1016/j.neuron.2021.10.014. Epub 2021 Nov 1. Neuron. 2022. PMID: 34727520 Free PMC article.

8

Kdm1a safeguards the topological boundaries of PRC2-repressed genes and prevents aging-related euchromatinization in neurons.

Del Blanco B, Niñerola S, Martín-González AM, Paraíso-Luna J, Kim M, Muñoz-Viana R, Racovac C, Sanchez-Mut JV, Ruan Y, Barco Á. Del Blanco B, et al. Among authors: ruan y. Nat Commun. 2024 Mar 7;15(1):1781. doi: 10.1038/s41467-024-45773-3. Nat Commun. 2024. PMID: 38453932 Free PMC article.

9

Publisher Correction: Super‑resolution visualization of chromatin loop folding in human lymphoblastoid cells using interferometric photoactivated localization microscopy.

Parteka-Tojek Z, Zhu JJ, Lee B, Jodkowska K, Wang P, Aaron J, Chew TL, Banecki K, Plewczynski D, Ruan Y. Parteka-Tojek Z, et al. Among authors: ruan y. Sci Rep. 2022 Dec 20;12(1):22014. doi: 10.1038/s41598-022-26502-6. Sci Rep. 2022. PMID: 36539456 Free PMC article. No abstract available.

10

IL-17 triggers PD-L1 gene transcription in NSCLC cells via TRIM31-dependent MEF2C K63-linked polyubiquitination.

Ying S, Wu N, Ruan Y, Ge W, Ma P, Xu T, Shu Y, Wang Y, Qiu W, Zhao C. Ying S, et al. Among authors: ruan y. BMC Cancer. 2025 Jan 14;25(1):81. doi: 10.1186/s12885-025-13473-w. BMC Cancer. 2025. PMID: 39810133 Free PMC article.

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