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Unbiased whole-genome deep sequencing of human and porcine stool samples reveals circulation of multiple groups of rotaviruses and a putative zoonotic infection.
Phan MVT, Anh PH, Cuong NV, Munnink BBO, van der Hoek L, My PT, Tri TN, Bryant JE, Baker S, Thwaites G, Woolhouse M, Kellam P, Rabaa MA, Cotten M; VIZIONS Consortium. Phan MVT, et al. Among authors: munnink bbo. Virus Evol. 2016 Oct 3;2(2):vew027. doi: 10.1093/ve/vew027. eCollection 2016 Jul. Virus Evol. 2016. PMID: 28748110 Free PMC article.
Tracking echovirus eleven outbreaks in Guangdong, China: a metatranscriptomic, phylogenetic, and epidemiological study.
Lu J, Kang M, Zeng H, Zhong Y, Fang L, Zheng X, Liu L, Yi L, Lin H, Peng J, Li C, Zhang Y, Sun L, Luo S, Xiao J, Munnink BBO, Koopmans MPG, Wu J, Zhang Y, Zhang Y, Song T, Li H, Zheng H. Lu J, et al. Among authors: munnink bbo. Virus Evol. 2020 May 10;6(1):veaa029. doi: 10.1093/ve/veaa029. eCollection 2020 Jan. Virus Evol. 2020. PMID: 32411392 Free PMC article.
Monitoring SARS-CoV-2 Circulation and Diversity through Community Wastewater Sequencing, the Netherlands and Belgium.
Izquierdo-Lara R, Elsinga G, Heijnen L, Munnink BBO, Schapendonk CME, Nieuwenhuijse D, Kon M, Lu L, Aarestrup FM, Lycett S, Medema G, Koopmans MPG, de Graaf M. Izquierdo-Lara R, et al. Among authors: munnink bbo. Emerg Infect Dis. 2021 May;27(5):1405-1415. doi: 10.3201/eid2705.204410. Emerg Infect Dis. 2021. PMID: 33900177 Free PMC article.
MERS-CoV in Camels but Not Camel Handlers, Sudan, 2015 and 2017.
Farag E, Sikkema RS, Mohamedani AA, de Bruin E, Munnink BBO, Chandler F, Kohl R, van der Linden A, Okba NMA, Haagmans BL, van den Brand JMA, Elhaj AM, Abakar AD, Nour BYM, Mohamed AM, Alwaseela BE, Ahmed H, Alhajri MM, Koopmans M, Reusken C, Elrahman SHA. Farag E, et al. Among authors: munnink bbo. Emerg Infect Dis. 2019 Dec;25(12):2333-2335. doi: 10.3201/eid2512.190882. Emerg Infect Dis. 2019. PMID: 31742534 Free PMC article.
Benchmark of thirteen bioinformatic pipelines for metagenomic virus diagnostics using datasets from clinical samples.
de Vries JJC, Brown JR, Fischer N, Sidorov IA, Morfopoulou S, Huang J, Munnink BBO, Sayiner A, Bulgurcu A, Rodriguez C, Gricourt G, Keyaerts E, Beller L, Bachofen C, Kubacki J, Samuel C, Florian L, Dennis S, Beer M, Hoeper D, Huber M, Kufner V, Zaheri M, Lebrand A, Papa A, van Boheemen S, Kroes ACM, Breuer J, Lopez-Labrador FX, Claas ECJ. de Vries JJC, et al. Among authors: munnink bbo. J Clin Virol. 2021 Aug;141:104908. doi: 10.1016/j.jcv.2021.104908. Epub 2021 Jul 8. J Clin Virol. 2021. PMID: 34273858 Free PMC article.
Overwintering of Usutu virus in mosquitoes, The Netherlands.
Koenraadt CJM, Münger E, Schrama MJJ, Spitzen J, Altundag S, Sikkema RS, Munnink BBO, Koopmans MPG, Blom R. Koenraadt CJM, et al. Among authors: munnink bbo. Parasit Vectors. 2024 Dec 23;17(1):537. doi: 10.1186/s13071-024-06620-y. Parasit Vectors. 2024. PMID: 39716210 Free PMC article.
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