Du X - Search Results

1

Detailed Investigation and Comparison of the XCMS and MZmine 2 Chromatogram Construction and Chromatographic Peak Detection Methods for Preprocessing Mass Spectrometry Metabolomics Data.

Myers OD, Sumner SJ, Li S, Barnes S, Du X. Myers OD, et al. Among authors: du x. Anal Chem. 2017 Sep 5;89(17):8689-8695. doi: 10.1021/acs.analchem.7b01069. Epub 2017 Aug 17. Anal Chem. 2017. PMID: 28752757

2

ADAP-GC 2.0: deconvolution of coeluting metabolites from GC/TOF-MS data for metabolomics studies.

Ni Y, Qiu Y, Jiang W, Suttlemyre K, Su M, Zhang W, Jia W, Du X. Ni Y, et al. Among authors: du x. Anal Chem. 2012 Aug 7;84(15):6619-29. doi: 10.1021/ac300898h. Epub 2012 Jul 12. Anal Chem. 2012. PMID: 22747237

3

Training in metabolomics research. I. Designing the experiment, collecting and extracting samples and generating metabolomics data.

Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Barnes S, et al. Among authors: du x. J Mass Spectrom. 2016 Jul;51(7):461-75. doi: 10.1002/jms.3782. J Mass Spectrom. 2016. PMID: 27434804 Free PMC article.

4

ADAP-GC 3.0: Improved Peak Detection and Deconvolution of Co-eluting Metabolites from GC/TOF-MS Data for Metabolomics Studies.

Ni Y, Su M, Qiu Y, Jia W, Du X. Ni Y, et al. Among authors: du x. Anal Chem. 2016 Sep 6;88(17):8802-11. doi: 10.1021/acs.analchem.6b02222. Epub 2016 Aug 8. Anal Chem. 2016. PMID: 27461032 Free PMC article.

5

Training in metabolomics research. II. Processing and statistical analysis of metabolomics data, metabolite identification, pathway analysis, applications of metabolomics and its future.

Barnes S, Benton HP, Casazza K, Cooper SJ, Cui X, Du X, Engler J, Kabarowski JH, Li S, Pathmasiri W, Prasain JK, Renfrow MB, Tiwari HK. Barnes S, et al. Among authors: du x. J Mass Spectrom. 2016 Aug;51(8):535-548. doi: 10.1002/jms.3780. J Mass Spectrom. 2016. PMID: 28239968 Free PMC article.

6

One Step Forward for Reducing False Positive and False Negative Compound Identifications from Mass Spectrometry Metabolomics Data: New Algorithms for Constructing Extracted Ion Chromatograms and Detecting Chromatographic Peaks.

Myers OD, Sumner SJ, Li S, Barnes S, Du X. Myers OD, et al. Among authors: du x. Anal Chem. 2017 Sep 5;89(17):8696-8703. doi: 10.1021/acs.analchem.7b00947. Epub 2017 Aug 17. Anal Chem. 2017. PMID: 28752754

7

ADAP-GC 3.2: Graphical Software Tool for Efficient Spectral Deconvolution of Gas Chromatography-High-Resolution Mass Spectrometry Metabolomics Data.

Smirnov A, Jia W, Walker DI, Jones DP, Du X. Smirnov A, et al. Among authors: du x. J Proteome Res. 2018 Jan 5;17(1):470-478. doi: 10.1021/acs.jproteome.7b00633. Epub 2017 Nov 7. J Proteome Res. 2018. PMID: 29076734

8

ADAP-GC 4.0: Application of Clustering-Assisted Multivariate Curve Resolution to Spectral Deconvolution of Gas Chromatography-Mass Spectrometry Metabolomics Data.

Smirnov A, Qiu Y, Jia W, Walker DI, Jones DP, Du X. Smirnov A, et al. Among authors: du x. Anal Chem. 2019 Jul 16;91(14):9069-9077. doi: 10.1021/acs.analchem.9b01424. Epub 2019 Jul 5. Anal Chem. 2019. PMID: 31274283 Free PMC article.

9

Cytosolic 10-formyltetrahydrofolate dehydrogenase regulates glycine metabolism in mouse liver.

Krupenko NI, Sharma J, Pediaditakis P, Fekry B, Helke KL, Du X, Sumner S, Krupenko SA. Krupenko NI, et al. Among authors: du x. Sci Rep. 2019 Oct 17;9(1):14937. doi: 10.1038/s41598-019-51397-1. Sci Rep. 2019. PMID: 31624291 Free PMC article.

10

Metabolomics Data Preprocessing Using ADAP and MZmine 2.

Du X, Smirnov A, Pluskal T, Jia W, Sumner S. Du X, et al. Methods Mol Biol. 2020;2104:25-48. doi: 10.1007/978-1-0716-0239-3_3. Methods Mol Biol. 2020. PMID: 31953811 Free PMC article.

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