Gao R - Search Results

1

Nanogrid single-nucleus RNA sequencing reveals phenotypic diversity in breast cancer.

Gao R, Kim C, Sei E, Foukakis T, Crosetto N, Chan LK, Srinivasan M, Zhang H, Meric-Bernstam F, Navin N. Gao R, et al. Nat Commun. 2017 Aug 9;8(1):228. doi: 10.1038/s41467-017-00244-w. Nat Commun. 2017. PMID: 28794488 Free PMC article.

2

Highly multiplexed targeted DNA sequencing from single nuclei.

Leung ML, Wang Y, Kim C, Gao R, Jiang J, Sei E, Navin NE. Leung ML, et al. Among authors: gao r. Nat Protoc. 2016 Feb;11(2):214-235. doi: 10.1038/nprot.2016.005. Epub 2016 Jan 7. Nat Protoc. 2016. PMID: 26741407 Free PMC article.

3

Punctuated copy number evolution and clonal stasis in triple-negative breast cancer.

Gao R, Davis A, McDonald TO, Sei E, Shi X, Wang Y, Tsai PC, Casasent A, Waters J, Zhang H, Meric-Bernstam F, Michor F, Navin NE. Gao R, et al. Nat Genet. 2016 Oct;48(10):1119-30. doi: 10.1038/ng.3641. Epub 2016 Aug 15. Nat Genet. 2016. PMID: 27526321 Free PMC article.

4

Tumor evolution: Linear, branching, neutral or punctuated?

Davis A, Gao R, Navin N. Davis A, et al. Among authors: gao r. Biochim Biophys Acta Rev Cancer. 2017 Apr;1867(2):151-161. doi: 10.1016/j.bbcan.2017.01.003. Epub 2017 Jan 19. Biochim Biophys Acta Rev Cancer. 2017. PMID: 28110020 Free PMC article. Review.

5

Single-cell DNA sequencing reveals a late-dissemination model in metastatic colorectal cancer.

Leung ML, Davis A, Gao R, Casasent A, Wang Y, Sei E, Vilar E, Maru D, Kopetz S, Navin NE. Leung ML, et al. Among authors: gao r. Genome Res. 2017 Aug;27(8):1287-1299. doi: 10.1101/gr.209973.116. Epub 2017 May 25. Genome Res. 2017. PMID: 28546418 Free PMC article.

6

Multiclonal Invasion in Breast Tumors Identified by Topographic Single Cell Sequencing.

Casasent AK, Schalck A, Gao R, Sei E, Long A, Pangburn W, Casasent T, Meric-Bernstam F, Edgerton ME, Navin NE. Casasent AK, et al. Among authors: gao r. Cell. 2018 Jan 11;172(1-2):205-217.e12. doi: 10.1016/j.cell.2017.12.007. Epub 2018 Jan 4. Cell. 2018. PMID: 29307488 Free PMC article.

7

Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing.

Kim C, Gao R, Sei E, Brandt R, Hartman J, Hatschek T, Crosetto N, Foukakis T, Navin NE. Kim C, et al. Among authors: gao r. Cell. 2018 May 3;173(4):879-893.e13. doi: 10.1016/j.cell.2018.03.041. Epub 2018 Apr 19. Cell. 2018. PMID: 29681456 Free PMC article.

8

SCOPIT: sample size calculations for single-cell sequencing experiments.

Davis A, Gao R, Navin NE. Davis A, et al. Among authors: gao r. BMC Bioinformatics. 2019 Nov 12;20(1):566. doi: 10.1186/s12859-019-3167-9. BMC Bioinformatics. 2019. PMID: 31718533 Free PMC article.

9

Delineating copy number and clonal substructure in human tumors from single-cell transcriptomes.

Gao R, Bai S, Henderson YC, Lin Y, Schalck A, Yan Y, Kumar T, Hu M, Sei E, Davis A, Wang F, Shaitelman SF, Wang JR, Chen K, Moulder S, Lai SY, Navin NE. Gao R, et al. Nat Biotechnol. 2021 May;39(5):599-608. doi: 10.1038/s41587-020-00795-2. Epub 2021 Jan 18. Nat Biotechnol. 2021. PMID: 33462507 Free PMC article.

10

MEDALT: single-cell copy number lineage tracing enabling gene discovery.

Wang F, Wang Q, Mohanty V, Liang S, Dou J, Han J, Minussi DC, Gao R, Ding L, Navin N, Chen K. Wang F, et al. Among authors: gao r. Genome Biol. 2021 Feb 23;22(1):70. doi: 10.1186/s13059-021-02291-5. Genome Biol. 2021. PMID: 33622385 Free PMC article.

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