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High-throughput single-molecule telomere characterization.
McCaffrey J, Young E, Lassahn K, Sibert J, Pastor S, Riethman H, Xiao M. McCaffrey J, et al. Among authors: xiao m. Genome Res. 2017 Nov;27(11):1904-1915. doi: 10.1101/gr.222422.117. Epub 2017 Oct 12. Genome Res. 2017. PMID: 29025896 Free PMC article.
Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.
Mak AC, Lai YY, Lam ET, Kwok TP, Leung AK, Poon A, Mostovoy Y, Hastie AR, Stedman W, Anantharaman T, Andrews W, Zhou X, Pang AW, Dai H, Chu C, Lin C, Wu JJ, Li CM, Li JW, Yim AK, Chan S, Sibert J, Džakula Ž, Cao H, Yiu SM, Chan TF, Yip KY, Xiao M, Kwok PY. Mak AC, et al. Among authors: xiao m. Genetics. 2016 Jan;202(1):351-62. doi: 10.1534/genetics.115.183483. Epub 2015 Oct 28. Genetics. 2016. PMID: 26510793 Free PMC article.
OMSV enables accurate and comprehensive identification of large structural variations from nanochannel-based single-molecule optical maps.
Li L, Leung AK, Kwok TP, Lai YYY, Pang IK, Chung GT, Mak ACY, Poon A, Chu C, Li M, Wu JJK, Lam ET, Cao H, Lin C, Sibert J, Yiu SM, Xiao M, Lo KW, Kwok PY, Chan TF, Yip KY. Li L, et al. Among authors: xiao m. Genome Biol. 2017 Dec 1;18(1):230. doi: 10.1186/s13059-017-1356-2. Genome Biol. 2017. PMID: 29195502 Free PMC article.
Genome maps across 26 human populations reveal population-specific patterns of structural variation.
Levy-Sakin M, Pastor S, Mostovoy Y, Li L, Leung AKY, McCaffrey J, Young E, Lam ET, Hastie AR, Wong KHY, Chung CYL, Ma W, Sibert J, Rajagopalan R, Jin N, Chow EYC, Chu C, Poon A, Lin C, Naguib A, Wang WP, Cao H, Chan TF, Yip KY, Xiao M, Kwok PY. Levy-Sakin M, et al. Among authors: xiao m. Nat Commun. 2019 Mar 4;10(1):1025. doi: 10.1038/s41467-019-08992-7. Nat Commun. 2019. PMID: 30833565 Free PMC article.
Analysis of Subtelomeric REXTAL Assemblies Using QUAST.
Islam T, Ranjan D, Zubair M, Young E, Xiao M, Riethman H. Islam T, et al. Among authors: xiao m. IEEE/ACM Trans Comput Biol Bioinform. 2021 Jan-Feb;18(1):365-372. doi: 10.1109/TCBB.2019.2913845. Epub 2021 Feb 3. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 31056507 Free PMC article.
The 22q11 low copy repeats are characterized by unprecedented size and structural variability.
Demaerel W, Mostovoy Y, Yilmaz F, Vervoort L, Pastor S, Hestand MS, Swillen A, Vergaelen E, Geiger EA, Coughlin CR, Chow SK, McDonald-McGinn D, Morrow B, Kwok PY, Xiao M, Emanuel BS, Shaikh TH, Vermeesch JR. Demaerel W, et al. Among authors: xiao m. Genome Res. 2019 Sep;29(9):1389-1401. doi: 10.1101/gr.248682.119. Genome Res. 2019. PMID: 31481461 Free PMC article.
5,154 results