Shannon CP - Search Results

1

Novel Blood-based Transcriptional Biomarker Panels Predict the Late-Phase Asthmatic Response.

Singh A, Shannon CP, Kim YW, Yang CX, Balshaw R, Cohen Freue GV, Gauvreau GM, FitzGerald JM, Boulet LP, O'Byrne PM, Tebbutt SJ. Singh A, et al. Among authors: shannon cp. Am J Respir Crit Care Med. 2018 Feb 15;197(4):450-462. doi: 10.1164/rccm.201701-0110OC. Am J Respir Crit Care Med. 2018. PMID: 29087730

2

White blood cell differentials enrich whole blood expression data in the context of acute cardiac allograft rejection.

Shannon CP, Hollander Z, Wilson-McManus J, Balshaw R, Ng RT, McMaster R, McManus BM, Keown PA, Tebbutt SJ. Shannon CP, et al. Bioinform Biol Insights. 2012;6:49-61. doi: 10.4137/BBI.S9197. Epub 2012 Apr 10. Bioinform Biol Insights. 2012. PMID: 22550401 Free PMC article.

3

Variation in RNA-Seq transcriptome profiles of peripheral whole blood from healthy individuals with and without globin depletion.

Shin H, Shannon CP, Fishbane N, Ruan J, Zhou M, Balshaw R, Wilson-McManus JE, Ng RT, McManus BM, Tebbutt SJ; PROOF Centre of Excellence Team. Shin H, et al. Among authors: shannon cp. PLoS One. 2014 Mar 7;9(3):e91041. doi: 10.1371/journal.pone.0091041. eCollection 2014. PLoS One. 2014. PMID: 24608128 Free PMC article.

4

Two-stage, in silico deconvolution of the lymphocyte compartment of the peripheral whole blood transcriptome in the context of acute kidney allograft rejection.

Shannon CP, Balshaw R, Ng RT, Wilson-McManus JE, Keown P, McMaster R, McManus BM, Landsberg D, Isbel NM, Knoll G, Tebbutt SJ. Shannon CP, et al. PLoS One. 2014 Apr 14;9(4):e95224. doi: 10.1371/journal.pone.0095224. eCollection 2014. PLoS One. 2014. PMID: 24733377 Free PMC article.

5

Transcriptional Changes of Blood Eosinophils After Methacholine Inhalation Challenge in Asthmatics.

Tebbutt SJ, He JQ, Singh A, Shannon CP, Ruan J, Carlsten C. Tebbutt SJ, et al. Among authors: shannon cp. Genomics Insights. 2012 Jan 30;5:1-12. doi: 10.4137/GEI.S9125. eCollection 2012. Genomics Insights. 2012. PMID: 26217105 Free PMC article.

6

Identifying Molecular Mechanisms of the Late-Phase Asthmatic Response by Integrating Cellular, Gene, and Metabolite Levels in Blood.

Singh A, Shannon CP, Kim YW, DeMarco ML, Gauvreau GM, FitzGerald JM, Boulet LP, O'Byrne PM, Le Cao KA, Tebbutt SJ. Singh A, et al. Among authors: shannon cp. Ann Am Thorac Soc. 2016 Mar;13 Suppl 1:S98. doi: 10.1513/AnnalsATS.201510-694MG. Ann Am Thorac Soc. 2016. PMID: 27027968

7

SABRE: a method for assessing the stability of gene modules in complex tissues and subject populations.

Shannon CP, Chen V, Takhar M, Hollander Z, Balshaw R, McManus BM, Tebbutt SJ, Sin DD, Ng RT. Shannon CP, et al. BMC Bioinformatics. 2016 Nov 14;17(1):460. doi: 10.1186/s12859-016-1319-8. BMC Bioinformatics. 2016. PMID: 27842512 Free PMC article.

8

Enumerateblood - an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles.

Shannon CP, Balshaw R, Chen V, Hollander Z, Toma M, McManus BM, FitzGerald JM, Sin DD, Ng RT, Tebbutt SJ. Shannon CP, et al. BMC Genomics. 2017 Jan 6;18(1):43. doi: 10.1186/s12864-016-3460-1. BMC Genomics. 2017. PMID: 28061752 Free PMC article.

9

A Targeted Proteomics Analysis of Cerebrospinal Fluid after Acute Human Spinal Cord Injury.

Streijger F, Skinnider MA, Rogalski JC, Balshaw R, Shannon CP, Prudova A, Belanger L, Ritchie L, Tsang A, Christie S, Parent S, Mac-Thiong JM, Bailey C, Urquhart J, Ailon T, Paquette S, Boyd M, Street J, Fisher CG, Dvorak MF, Borchers CH, Foster LJ, Kwon BK. Streijger F, et al. Among authors: shannon cp. J Neurotrauma. 2017 Jun 15;34(12):2054-2068. doi: 10.1089/neu.2016.4879. Epub 2017 Apr 7. J Neurotrauma. 2017. PMID: 28276985

10

Network-based analysis reveals novel gene signatures in peripheral blood of patients with chronic obstructive pulmonary disease.

Obeidat M, Nie Y, Chen V, Shannon CP, Andiappan AK, Lee B, Rotzschke O, Castaldi PJ, Hersh CP, Fishbane N, Ng RT, McManus B, Miller BE, Rennard S, Paré PD, Sin DD. Obeidat M, et al. Among authors: shannon cp. Respir Res. 2017 Apr 24;18(1):72. doi: 10.1186/s12931-017-0558-1. Respir Res. 2017. PMID: 28438154 Free PMC article. Clinical Trial.

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