Niida A - Search Results

1

Impediment of Replication Forks by Long Non-coding RNA Provokes Chromosomal Rearrangements by Error-Prone Restart.

Watanabe T, Marotta M, Suzuki R, Diede SJ, Tapscott SJ, Niida A, Chen X, Mouakkad L, Kondratova A, Giuliano AE, Orsulic S, Tanaka H. Watanabe T, et al. Among authors: niida a. Cell Rep. 2017 Nov 21;21(8):2223-2235. doi: 10.1016/j.celrep.2017.10.103. Cell Rep. 2017. PMID: 29166612 Free PMC article.

2

Palindromic amplification of the ERBB2 oncogene in primary HER2-positive breast tumors.

Marotta M, Onodera T, Johnson J, Budd GT, Watanabe T, Cui X, Giuliano AE, Niida A, Tanaka H. Marotta M, et al. Among authors: niida a. Sci Rep. 2017 Feb 17;7:41921. doi: 10.1038/srep41921. Sci Rep. 2017. PMID: 28211519 Free PMC article.

3

Spatial and single-cell transcriptomics decipher the cellular environment containing HLA-G+ cancer cells and SPP1+ macrophages in colorectal cancer.

Ozato Y, Kojima Y, Kobayashi Y, Hisamatsu Y, Toshima T, Yonemura Y, Masuda T, Kagawa K, Goto Y, Utou M, Fukunaga M, Gamachi A, Imamura K, Kuze Y, Zenkoh J, Suzuki A, Niida A, Hirose H, Hayashi S, Koseki J, Oki E, Fukuchi S, Murakami K, Tobo T, Nagayama S, Uemura M, Sakamoto T, Oshima M, Doki Y, Eguchi H, Mori M, Iwasaki T, Oda Y, Shibata T, Suzuki Y, Shimamura T, Mimori K. Ozato Y, et al. Among authors: niida a. Cell Rep. 2023 Jan 31;42(1):111929. doi: 10.1016/j.celrep.2022.111929. Epub 2023 Jan 18. Cell Rep. 2023. PMID: 36656712 Free article.

4

Interaction-Based Feature Selection for Uncovering Cancer Driver Genes Through Copy Number-Driven Expression Level.

Park H, Niida A, Imoto S, Miyano S. Park H, et al. Among authors: niida a. J Comput Biol. 2017 Feb;24(2):138-152. doi: 10.1089/cmb.2016.0140. Epub 2016 Oct 19. J Comput Biol. 2017. PMID: 27759426

5

Variant analysis of prostate cancer in Japanese patients and a new attempt to predict related biological pathways.

Kasajima R, Yamaguchi R, Shimizu E, Tamada Y, Niida A, Tremmel G, Kishida T, Aoki I, Imoto S, Miyano S, Uemura H, Miyagi Y. Kasajima R, et al. Among authors: niida a. Oncol Rep. 2020 Mar;43(3):943-952. doi: 10.3892/or.2020.7481. Epub 2020 Jan 27. Oncol Rep. 2020. PMID: 32020225

6

Integrative bioinformatics analysis of transcriptional regulatory programs in breast cancer cells.

Niida A, Smith AD, Imoto S, Tsutsumi S, Aburatani H, Zhang MQ, Akiyama T. Niida A, et al. BMC Bioinformatics. 2008 Sep 29;9:404. doi: 10.1186/1471-2105-9-404. BMC Bioinformatics. 2008. PMID: 18823535 Free PMC article.

7

Gene set-based module discovery in the breast cancer transcriptome.

Niida A, Smith AD, Imoto S, Aburatani H, Zhang MQ, Akiyama T. Niida A, et al. BMC Bioinformatics. 2009 Feb 26;10:71. doi: 10.1186/1471-2105-10-71. BMC Bioinformatics. 2009. PMID: 19243633 Free PMC article.

8

A novel meta-analysis approach of cancer transcriptomes reveals prevailing transcriptional networks in cancer cells.

Niida A, Imoto S, Nagasaki M, Yamaguchi R, Miyano S. Niida A, et al. Genome Inform. 2010 Jan;22:121-31. Genome Inform. 2010. PMID: 20238423

9

Gene set-based module discovery decodes cis-regulatory codes governing diverse gene expression across human multiple tissues.

Niida A, Imoto S, Yamaguchi R, Nagasaki M, Miyano S. Niida A, et al. PLoS One. 2010 Jun 9;5(6):e10910. doi: 10.1371/journal.pone.0010910. PLoS One. 2010. PMID: 20544005 Free PMC article.

10

A novel network profiling analysis reveals system changes in epithelial-mesenchymal transition.

Shimamura T, Imoto S, Shimada Y, Hosono Y, Niida A, Nagasaki M, Yamaguchi R, Takahashi T, Miyano S. Shimamura T, et al. Among authors: niida a. PLoS One. 2011;6(6):e20804. doi: 10.1371/journal.pone.0020804. Epub 2011 Jun 7. PLoS One. 2011. PMID: 21687740 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

107 results

Search Page

Filters