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MePIC, metagenomic pathogen identification for clinical specimens.
Takeuchi F, Sekizuka T, Yamashita A, Ogasawara Y, Mizuta K, Kuroda M. Takeuchi F, et al. Among authors: yamashita a. Jpn J Infect Dis. 2014;67(1):62-5. doi: 10.7883/yoken.67.62. Jpn J Infect Dis. 2014. PMID: 24451106 Free article.
VirusTAP: Viral Genome-Targeted Assembly Pipeline.
Yamashita A, Sekizuka T, Kuroda M. Yamashita A, et al. Front Microbiol. 2016 Feb 2;7:32. doi: 10.3389/fmicb.2016.00032. eCollection 2016. Front Microbiol. 2016. PMID: 26870004 Free PMC article.
Two different dengue virus strains in the Japanese epidemics of 2014.
Nakayama E, Kotaki A, Tajima S, Kawada M, Miura K, Gemma A, Adachi T, Sekizuka T, Kato K, Yamashita A, Moi ML, Ikeda M, Yagasaki K, Shibasaki K, Saijo M, Kuroda M, Takasaki T. Nakayama E, et al. Among authors: yamashita a. Virus Genes. 2016 Oct;52(5):722-6. doi: 10.1007/s11262-016-1356-4. Epub 2016 May 26. Virus Genes. 2016. PMID: 27229877
Characterization of the Pathogenicity of Streptococcus intermedius TYG1620 Isolated from a Human Brain Abscess Based on the Complete Genome Sequence with Transcriptome Analysis and Transposon Mutagenesis in a Murine Subcutaneous Abscess Model.
Hasegawa N, Sekizuka T, Sugi Y, Kawakami N, Ogasawara Y, Kato K, Yamashita A, Takeuchi F, Kuroda M. Hasegawa N, et al. Among authors: yamashita a. Infect Immun. 2017 Jan 26;85(2):e00886-16. doi: 10.1128/IAI.00886-16. Print 2017 Feb. Infect Immun. 2017. PMID: 27895128 Free PMC article.
Whole-genome sequencing-based epidemiological analysis of anti-tuberculosis drug resistance genes in Japan in 2007: Application of the Genome Research for Asian Tuberculosis (GReAT) database.
Takii T, Seki K, Wakabayashi Y, Morishige Y, Sekizuka T, Yamashita A, Kato K, Uchimura K, Ohkado A, Keicho N, Mitarai S, Kuroda M, Kato S. Takii T, et al. Among authors: yamashita a. Sci Rep. 2019 Sep 6;9(1):12823. doi: 10.1038/s41598-019-49219-5. Sci Rep. 2019. PMID: 31492902 Free PMC article.
1,787 results