Nilsson L - Search Results

1

Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima.

Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J. Morgunova E, et al. Among authors: nilsson l. Elife. 2018 Apr 11;7:e32963. doi: 10.7554/eLife.32963. Elife. 2018. PMID: 29638214 Free PMC article.

2

Structural insights into the DNA-binding specificity of E2F family transcription factors.

Morgunova E, Yin Y, Jolma A, Dave K, Schmierer B, Popov A, Eremina N, Nilsson L, Taipale J. Morgunova E, et al. Among authors: nilsson l. Nat Commun. 2015 Dec 3;6:10050. doi: 10.1038/ncomms10050. Nat Commun. 2015. PMID: 26632596 Free PMC article.

3

Additive CHARMM force field for naturally occurring modified ribonucleotides.

Xu Y, Vanommeslaeghe K, Aleksandrov A, MacKerell AD Jr, Nilsson L. Xu Y, et al. Among authors: nilsson l. J Comput Chem. 2016 Apr 15;37(10):896-912. doi: 10.1002/jcc.24307. Epub 2016 Feb 3. J Comput Chem. 2016. PMID: 26841080 Free PMC article.

4

Structural effects of modified ribonucleotides and magnesium in transfer RNAs.

Xu Y, MacKerell AD Jr, Nilsson L. Xu Y, et al. Among authors: nilsson l. Bioorg Med Chem. 2016 Oct 15;24(20):4826-4834. doi: 10.1016/j.bmc.2016.06.037. Epub 2016 Jun 18. Bioorg Med Chem. 2016. PMID: 27364608 Free PMC article.

5

The free energy of locking a ring: Changing a deoxyribonucleoside to a locked nucleic acid.

Xu Y, Villa A, Nilsson L. Xu Y, et al. Among authors: nilsson l. J Comput Chem. 2017 Jun 5;38(15):1147-1157. doi: 10.1002/jcc.24692. Epub 2017 Jan 19. J Comput Chem. 2017. PMID: 28101966 Free PMC article.

6

LNA effects on DNA binding and conformation: from single strand to duplex and triplex structures.

Pabon-Martinez YV, Xu Y, Villa A, Lundin KE, Geny S, Nguyen CH, Pedersen EB, Jørgensen PT, Wengel J, Nilsson L, Smith CIE, Zain R. Pabon-Martinez YV, et al. Among authors: nilsson l. Sci Rep. 2017 Sep 8;7(1):11043. doi: 10.1038/s41598-017-09147-8. Sci Rep. 2017. PMID: 28887512 Free PMC article.

7

Modeling p K Shift in DNA Triplexes Containing Locked Nucleic Acids.

Hartono YD, Xu Y, Karshikoff A, Nilsson L, Villa A. Hartono YD, et al. Among authors: nilsson l. J Chem Inf Model. 2018 Apr 23;58(4):773-783. doi: 10.1021/acs.jcim.7b00741. Epub 2018 Mar 23. J Chem Inf Model. 2018. PMID: 29537270 Free article.

8

The ability of locked nucleic acid oligonucleotides to pre-structure the double helix: A molecular simulation and binding study.

Xu Y, Gissberg O, Pabon-Martinez YV, Wengel J, Lundin KE, Smith CIE, Zain R, Nilsson L, Villa A. Xu Y, et al. Among authors: nilsson l. PLoS One. 2019 Feb 12;14(2):e0211651. doi: 10.1371/journal.pone.0211651. eCollection 2019. PLoS One. 2019. PMID: 30753192 Free PMC article.

9

Structure, thermodynamics and cooperativity of the glucocorticoid receptor DNA-binding domain in complex with different response elements. Molecular dynamics simulation and free energy perturbation studies.

Eriksson MA, Nilsson L. Eriksson MA, et al. Among authors: nilsson l. J Mol Biol. 1995 Oct 27;253(3):453-72. doi: 10.1006/jmbi.1995.0566. J Mol Biol. 1995. PMID: 7473727

10

Modulation of DNA-binding specificity within the nuclear receptor family by substitutions at a single amino acid position.

Zilliacus J, Wright AP, Carlstedt-Duke J, Nilsson L, Gustafsson JA. Zilliacus J, et al. Among authors: nilsson l. Proteins. 1995 Jan;21(1):57-67. doi: 10.1002/prot.340210107. Proteins. 1995. PMID: 7716169

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My Custom Filters

Publication date

Text availability

Article attribute

Article type

Article Language

Species

Sex

Age

Other

2,164 results

Search Page

Filters