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scANANSE gene regulatory network and motif analysis of single-cell clusters.
Smits JGA, Arts JA, Frölich S, Snabel RR, Heuts BMH, Martens JHA, van Heeringen SJ, Zhou H. Smits JGA, et al. Among authors: van heeringen sj. F1000Res. 2023 Mar 6;12:243. doi: 10.12688/f1000research.130530.1. eCollection 2023. F1000Res. 2023. PMID: 38116584 Free PMC article.
Characterization of genome-wide p53-binding sites upon stress response.
Smeenk L, van Heeringen SJ, Koeppel M, van Driel MA, Bartels SJ, Akkers RC, Denissov S, Stunnenberg HG, Lohrum M. Smeenk L, et al. Among authors: van heeringen sj, van driel ma. Nucleic Acids Res. 2008 Jun;36(11):3639-54. doi: 10.1093/nar/gkn232. Epub 2008 May 12. Nucleic Acids Res. 2008. PMID: 18474530 Free PMC article.
Genome-wide profiling of p63 DNA-binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus.
Kouwenhoven EN, van Heeringen SJ, Tena JJ, Oti M, Dutilh BE, Alonso ME, de la Calle-Mustienes E, Smeenk L, Rinne T, Parsaulian L, Bolat E, Jurgelenaite R, Huynen MA, Hoischen A, Veltman JA, Brunner HG, Roscioli T, Oates E, Wilson M, Manzanares M, Gómez-Skarmeta JL, Stunnenberg HG, Lohrum M, van Bokhoven H, Zhou H. Kouwenhoven EN, et al. Among authors: van heeringen sj, van bokhoven h. PLoS Genet. 2010 Aug 19;6(8):e1001065. doi: 10.1371/journal.pgen.1001065. PLoS Genet. 2010. PMID: 20808887 Free PMC article.
Role of p53 serine 46 in p53 target gene regulation.
Smeenk L, van Heeringen SJ, Koeppel M, Gilbert B, Janssen-Megens E, Stunnenberg HG, Lohrum M. Smeenk L, et al. Among authors: van heeringen sj. PLoS One. 2011 Mar 4;6(3):e17574. doi: 10.1371/journal.pone.0017574. PLoS One. 2011. PMID: 21394211 Free PMC article.
54 results