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The role of gene flow in rapid and repeated evolution of cave-related traits in Mexican tetra, Astyanax mexicanus.
Herman A, Brandvain Y, Weagley J, Jeffery WR, Keene AC, Kono TJY, Bilandžija H, Borowsky R, Espinasa L, O'Quin K, Ornelas-García CP, Yoshizawa M, Carlson B, Maldonado E, Gross JB, Cartwright RA, Rohner N, Warren WC, McGaugh SE. Herman A, et al. Among authors: warren wc. Mol Ecol. 2018 Nov;27(22):4397-4416. doi: 10.1111/mec.14877. Epub 2018 Oct 16. Mol Ecol. 2018. PMID: 30252986 Free PMC article.
The cavefish genome reveals candidate genes for eye loss.
McGaugh SE, Gross JB, Aken B, Blin M, Borowsky R, Chalopin D, Hinaux H, Jeffery WR, Keene A, Ma L, Minx P, Murphy D, O'Quin KE, Rétaux S, Rohner N, Searle SM, Stahl BA, Tabin C, Volff JN, Yoshizawa M, Warren WC. McGaugh SE, et al. Among authors: warren wc. Nat Commun. 2014 Oct 20;5:5307. doi: 10.1038/ncomms6307. Nat Commun. 2014. PMID: 25329095 Free PMC article.
Molecular Adaptations for Sensing and Securing Prey and Insight into Amniote Genome Diversity from the Garter Snake Genome.
Perry BW, Card DC, McGlothlin JW, Pasquesi GIM, Adams RH, Schield DR, Hales NR, Corbin AB, Demuth JP, Hoffmann FG, Vandewege MW, Schott RK, Bhattacharyya N, Chang BSW, Casewell NR, Whiteley G, Reyes-Velasco J, Mackessy SP, Gamble T, Storey KB, Biggar KK, Passow CN, Kuo CH, McGaugh SE, Bronikowski AM, de Koning APJ, Edwards SV, Pfrender ME, Minx P, Brodie ED 3rd, Brodie ED Jr, Warren WC, Castoe TA. Perry BW, et al. Among authors: warren wc. Genome Biol Evol. 2018 Aug 1;10(8):2110-2129. doi: 10.1093/gbe/evy157. Genome Biol Evol. 2018. PMID: 30060036 Free PMC article.
A chromosome-level genome of Astyanax mexicanus surface fish for comparing population-specific genetic differences contributing to trait evolution.
Warren WC, Boggs TE, Borowsky R, Carlson BM, Ferrufino E, Gross JB, Hillier L, Hu Z, Keene AC, Kenzior A, Kowalko JE, Tomlinson C, Kremitzki M, Lemieux ME, Graves-Lindsay T, McGaugh SE, Miller JT, Mommersteeg MTM, Moran RL, Peuß R, Rice ES, Riddle MR, Sifuentes-Romero I, Stanhope BA, Tabin CJ, Thakur S, Yamamoto Y, Rohner N. Warren WC, et al. Nat Commun. 2021 Mar 4;12(1):1447. doi: 10.1038/s41467-021-21733-z. Nat Commun. 2021. PMID: 33664263 Free PMC article.
Astyanax mexicanus surface and cavefish chromosome-scale assemblies for trait variation discovery.
Warren WC, Rice ES, Maggs X, Roback E, Keene A, Martin F, Ogeh D, Haggerty L, Carroll RA, McGaugh S, Rohner N. Warren WC, et al. bioRxiv [Preprint]. 2023 Nov 20:2023.11.16.567450. doi: 10.1101/2023.11.16.567450. bioRxiv. 2023. Update in: G3 (Bethesda). 2024 Aug 7;14(8):jkae103. doi: 10.1093/g3journal/jkae103 PMID: 38014157 Free PMC article. Updated. Preprint.
Comparative genomics based on massive parallel transcriptome sequencing reveals patterns of substitution and selection across 10 bird species.
Künstner A, Wolf JB, Backström N, Whitney O, Balakrishnan CN, Day L, Edwards SV, Janes DE, Schlinger BA, Wilson RK, Jarvis ED, Warren WC, Ellegren H. Künstner A, et al. Among authors: warren wc. Mol Ecol. 2010 Mar;19 Suppl 1(Suppl 1):266-76. doi: 10.1111/j.1365-294X.2009.04487.x. Mol Ecol. 2010. PMID: 20331785 Free PMC article.
223 results