Nabel CS - Search Results

1

Nondestructive, base-resolution sequencing of 5-hydroxymethylcytosine using a DNA deaminase.

Schutsky EK, DeNizio JE, Hu P, Liu MY, Nabel CS, Fabyanic EB, Hwang Y, Bushman FD, Wu H, Kohli RM. Schutsky EK, et al. Among authors: nabel cs. Nat Biotechnol. 2018 Oct 8:10.1038/nbt.4204. doi: 10.1038/nbt.4204. Online ahead of print. Nat Biotechnol. 2018. PMID: 30295673 Free PMC article.

2

AID/APOBEC deaminases disfavor modified cytosines implicated in DNA demethylation.

Nabel CS, Jia H, Ye Y, Shen L, Goldschmidt HL, Stivers JT, Zhang Y, Kohli RM. Nabel CS, et al. Nat Chem Biol. 2012 Sep;8(9):751-8. doi: 10.1038/nchembio.1042. Epub 2012 Jul 8. Nat Chem Biol. 2012. PMID: 22772155 Free PMC article.

3

Nucleic acid determinants for selective deamination of DNA over RNA by activation-induced deaminase.

Nabel CS, Lee JW, Wang LC, Kohli RM. Nabel CS, et al. Proc Natl Acad Sci U S A. 2013 Aug 27;110(35):14225-30. doi: 10.1073/pnas.1306345110. Epub 2013 Aug 13. Proc Natl Acad Sci U S A. 2013. PMID: 23942124 Free PMC article.

4

Tet2 Catalyzes Stepwise 5-Methylcytosine Oxidation by an Iterative and de novo Mechanism.

Crawford DJ, Liu MY, Nabel CS, Cao XJ, Garcia BA, Kohli RM. Crawford DJ, et al. Among authors: nabel cs. J Am Chem Soc. 2016 Jan 27;138(3):730-3. doi: 10.1021/jacs.5b10554. Epub 2016 Jan 13. J Am Chem Soc. 2016. PMID: 26734843 Free PMC article.

5

APOBEC3A efficiently deaminates methylated, but not TET-oxidized, cytosine bases in DNA.

Schutsky EK, Nabel CS, Davis AKF, DeNizio JE, Kohli RM. Schutsky EK, et al. Among authors: nabel cs. Nucleic Acids Res. 2017 Jul 27;45(13):7655-7665. doi: 10.1093/nar/gkx345. Nucleic Acids Res. 2017. PMID: 28472485 Free PMC article.

6

Molecular biology. Demystifying DNA demethylation.

Nabel CS, Kohli RM. Nabel CS, et al. Science. 2011 Sep 2;333(6047):1229-30. doi: 10.1126/science.1211917. Science. 2011. PMID: 21885763 No abstract available.

7

The curious chemical biology of cytosine: deamination, methylation, and oxidation as modulators of genomic potential.

Nabel CS, Manning SA, Kohli RM. Nabel CS, et al. ACS Chem Biol. 2012 Jan 20;7(1):20-30. doi: 10.1021/cb2002895. Epub 2011 Oct 31. ACS Chem Biol. 2012. PMID: 22004246 Free PMC article. Review.

8

Molecular targeting of mutagenic AID and APOBEC deaminases.

Nabel CS, Schutsky EK, Kohli RM. Nabel CS, et al. Cell Cycle. 2014;13(2):171-2. doi: 10.4161/cc.27036. Epub 2013 Nov 15. Cell Cycle. 2014. PMID: 24241207 Free PMC article. No abstract available.

9

DNA Methyltransferases Demonstrate Reduced Activity against Arabinosylcytosine: Implications for Epigenetic Instability in Acute Myeloid Leukemia.

Nabel CS, DeNizio JE, Carroll M, Kohli RM. Nabel CS, et al. Biochemistry. 2017 Apr 25;56(16):2166-2169. doi: 10.1021/acs.biochem.7b00208. Epub 2017 Apr 12. Biochemistry. 2017. PMID: 28394581 Free PMC article.

10

A tool kit for quantifying eukaryotic rRNA gene sequences from human microbiome samples.

Dollive S, Peterfreund GL, Sherrill-Mix S, Bittinger K, Sinha R, Hoffmann C, Nabel CS, Hill DA, Artis D, Bachman MA, Custers-Allen R, Grunberg S, Wu GD, Lewis JD, Bushman FD. Dollive S, et al. Among authors: nabel cs. Genome Biol. 2012 Jul 3;13(7):R60. doi: 10.1186/gb-2012-13-7-r60. Genome Biol. 2012. PMID: 22759449 Free PMC article.

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