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The jPOST environment: an integrated proteomics data repository and database.
Moriya Y, Kawano S, Okuda S, Watanabe Y, Matsumoto M, Takami T, Kobayashi D, Yamanouchi Y, Araki N, Yoshizawa AC, Tabata T, Iwasaki M, Sugiyama N, Tanaka S, Goto S, Ishihama Y. Moriya Y, et al. Among authors: tanaka s. Nucleic Acids Res. 2019 Jan 8;47(D1):D1218-D1224. doi: 10.1093/nar/gky899. Nucleic Acids Res. 2019. PMID: 30295851 Free PMC article.
Mass++: A Visualization and Analysis Tool for Mass Spectrometry.
Tanaka S, Fujita Y, Parry HE, Yoshizawa AC, Morimoto K, Murase M, Yamada Y, Yao J, Utsunomiya SI, Kajihara S, Fukuda M, Ikawa M, Tabata T, Takahashi K, Aoshima K, Nihei Y, Nishioka T, Oda Y, Tanaka K. Tanaka S, et al. Among authors: tanaka k. J Proteome Res. 2014 Aug 1;13(8):3846-3853. doi: 10.1021/pr500155z. Epub 2014 Jul 7. J Proteome Res. 2014. PMID: 24965016
jPOST environment accelerates the reuse and reanalysis of public proteome mass spectrometry data.
Okuda S, Yoshizawa AC, Kobayashi D, Takahashi Y, Watanabe Y, Moriya Y, Hatano A, Takami T, Matsumoto M, Araki N, Tabata T, Iwasaki M, Sugiyama N, Kodera Y, Tanaka S, Goto S, Kawano S, Ishihama Y. Okuda S, et al. Among authors: tanaka s. Nucleic Acids Res. 2025 Jan 6;53(D1):D462-D467. doi: 10.1093/nar/gkae1032. Nucleic Acids Res. 2025. PMID: 39526391 Free PMC article.
MassBank: a public repository for sharing mass spectral data for life sciences.
Horai H, Arita M, Kanaya S, Nihei Y, Ikeda T, Suwa K, Ojima Y, Tanaka K, Tanaka S, Aoshima K, Oda Y, Kakazu Y, Kusano M, Tohge T, Matsuda F, Sawada Y, Hirai MY, Nakanishi H, Ikeda K, Akimoto N, Maoka T, Takahashi H, Ara T, Sakurai N, Suzuki H, Shibata D, Neumann S, Iida T, Tanaka K, Funatsu K, Matsuura F, Soga T, Taguchi R, Saito K, Nishioka T. Horai H, et al. Among authors: tanaka k, tanaka s. J Mass Spectrom. 2010 Jul;45(7):703-14. doi: 10.1002/jms.1777. J Mass Spectrom. 2010. PMID: 20623627
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