Fröhlich F - Search Results

1

Efficient Parameter Estimation Enables the Prediction of Drug Response Using a Mechanistic Pan-Cancer Pathway Model.

Fröhlich F, Kessler T, Weindl D, Shadrin A, Schmiester L, Hache H, Muradyan A, Schütte M, Lim JH, Heinig M, Theis FJ, Lehrach H, Wierling C, Lange B, Hasenauer J. Fröhlich F, et al. Cell Syst. 2018 Dec 26;7(6):567-579.e6. doi: 10.1016/j.cels.2018.10.013. Epub 2018 Nov 28. Cell Syst. 2018. PMID: 30503647 Free article.

2

CERENA: ChEmical REaction Network Analyzer--A Toolbox for the Simulation and Analysis of Stochastic Chemical Kinetics.

Kazeroonian A, Fröhlich F, Raue A, Theis FJ, Hasenauer J. Kazeroonian A, et al. Among authors: frohlich f. PLoS One. 2016 Jan 25;11(1):e0146732. doi: 10.1371/journal.pone.0146732. eCollection 2016. PLoS One. 2016. PMID: 26807911 Free PMC article.

3

Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion.

Fröhlich F, Thomas P, Kazeroonian A, Theis FJ, Grima R, Hasenauer J. Fröhlich F, et al. PLoS Comput Biol. 2016 Jul 22;12(7):e1005030. doi: 10.1371/journal.pcbi.1005030. eCollection 2016 Jul. PLoS Comput Biol. 2016. PMID: 27447730 Free PMC article.

4

Parameter estimation for dynamical systems with discrete events and logical operations.

Fröhlich F, Theis FJ, Rädler JO, Hasenauer J. Fröhlich F, et al. Bioinformatics. 2017 Apr 1;33(7):1049-1056. doi: 10.1093/bioinformatics/btw764. Bioinformatics. 2017. PMID: 28040696

5

Scalable Parameter Estimation for Genome-Scale Biochemical Reaction Networks.

Fröhlich F, Kaltenbacher B, Theis FJ, Hasenauer J. Fröhlich F, et al. PLoS Comput Biol. 2017 Jan 23;13(1):e1005331. doi: 10.1371/journal.pcbi.1005331. eCollection 2017 Jan. PLoS Comput Biol. 2017. PMID: 28114351 Free PMC article.

6

PESTO: Parameter EStimation TOolbox.

Stapor P, Weindl D, Ballnus B, Hug S, Loos C, Fiedler A, Krause S, Hroß S, Fröhlich F, Hasenauer J. Stapor P, et al. Among authors: frohlich f. Bioinformatics. 2018 Feb 15;34(4):705-707. doi: 10.1093/bioinformatics/btx676. Bioinformatics. 2018. PMID: 29069312 Free PMC article.

7

GenSSI 2.0: multi-experiment structural identifiability analysis of SBML models.

Ligon TS, Fröhlich F, Chis OT, Banga JR, Balsa-Canto E, Hasenauer J. Ligon TS, et al. Among authors: frohlich f. Bioinformatics. 2018 Apr 15;34(8):1421-1423. doi: 10.1093/bioinformatics/btx735. Bioinformatics. 2018. PMID: 29206901 Free PMC article.

8

A Hierarchical, Data-Driven Approach to Modeling Single-Cell Populations Predicts Latent Causes of Cell-To-Cell Variability.

Loos C, Moeller K, Fröhlich F, Hucho T, Hasenauer J. Loos C, et al. Among authors: frohlich f. Cell Syst. 2018 May 23;6(5):593-603.e13. doi: 10.1016/j.cels.2018.04.008. Epub 2018 May 2. Cell Syst. 2018. PMID: 29730254 Free article.

9

Optimization and profile calculation of ODE models using second order adjoint sensitivity analysis.

Stapor P, Fröhlich F, Hasenauer J. Stapor P, et al. Among authors: frohlich f. Bioinformatics. 2018 Jul 1;34(13):i151-i159. doi: 10.1093/bioinformatics/bty230. Bioinformatics. 2018. PMID: 29949990 Free PMC article.

10

Scalable Inference of Ordinary Differential Equation Models of Biochemical Processes.

Fröhlich F, Loos C, Hasenauer J. Fröhlich F, et al. Methods Mol Biol. 2019;1883:385-422. doi: 10.1007/978-1-4939-8882-2_16. Methods Mol Biol. 2019. PMID: 30547409 Review.

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