Theis FJ - Search Results

1

Efficient Parameter Estimation Enables the Prediction of Drug Response Using a Mechanistic Pan-Cancer Pathway Model.

Fröhlich F, Kessler T, Weindl D, Shadrin A, Schmiester L, Hache H, Muradyan A, Schütte M, Lim JH, Heinig M, Theis FJ, Lehrach H, Wierling C, Lange B, Hasenauer J. Fröhlich F, et al. Among authors: theis fj. Cell Syst. 2018 Dec 26;7(6):567-579.e6. doi: 10.1016/j.cels.2018.10.013. Epub 2018 Nov 28. Cell Syst. 2018. PMID: 30503647 Free article.

2

Transforming Boolean models to continuous models: methodology and application to T-cell receptor signaling.

Wittmann DM, Krumsiek J, Saez-Rodriguez J, Lauffenburger DA, Klamt S, Theis FJ. Wittmann DM, et al. Among authors: theis fj. BMC Syst Biol. 2009 Sep 28;3:98. doi: 10.1186/1752-0509-3-98. BMC Syst Biol. 2009. PMID: 19785753 Free PMC article.

3

High-dimensional Bayesian parameter estimation: case study for a model of JAK2/STAT5 signaling.

Hug S, Raue A, Hasenauer J, Bachmann J, Klingmüller U, Timmer J, Theis FJ. Hug S, et al. Among authors: theis fj. Math Biosci. 2013 Dec;246(2):293-304. doi: 10.1016/j.mbs.2013.04.002. Epub 2013 Apr 16. Math Biosci. 2013. PMID: 23602931

4

Sharpening of expression domains induced by transcription and microRNA regulation within a spatio-temporal model of mid-hindbrain boundary formation.

Hock S, Ng YK, Hasenauer J, Wittmann D, Lutter D, Trümbach D, Wurst W, Prakash N, Theis FJ. Hock S, et al. Among authors: theis fj. BMC Syst Biol. 2013 Jun 25;7:48. doi: 10.1186/1752-0509-7-48. BMC Syst Biol. 2013. PMID: 23799959 Free PMC article.

5

Wound-healing growth factor, basic FGF, induces Erk1/2-dependent mechanical hyperalgesia.

Andres C, Hasenauer J, Ahn HS, Joseph EK, Isensee J, Theis FJ, Allgöwer F, Levine JD, Dib-Hajj SD, Waxman SG, Hucho T. Andres C, et al. Among authors: theis fj. Pain. 2013 Oct;154(10):2216-2226. doi: 10.1016/j.pain.2013.07.005. Epub 2013 Jul 16. Pain. 2013. PMID: 23867734

6

Method of conditional moments (MCM) for the Chemical Master Equation: a unified framework for the method of moments and hybrid stochastic-deterministic models.

Hasenauer J, Wolf V, Kazeroonian A, Theis FJ. Hasenauer J, et al. Among authors: theis fj. J Math Biol. 2014 Sep;69(3):687-735. doi: 10.1007/s00285-013-0711-5. Epub 2013 Aug 6. J Math Biol. 2014. PMID: 23918091

7

Modeling of 2D diffusion processes based on microscopy data: parameter estimation and practical identifiability analysis.

Hock S, Hasenauer J, Theis FJ. Hock S, et al. Among authors: theis fj. BMC Bioinformatics. 2013;14 Suppl 10(Suppl 10):S7. doi: 10.1186/1471-2105-14-S10-S7. Epub 2013 Aug 12. BMC Bioinformatics. 2013. PMID: 24267545 Free PMC article.

8

iVUN: interactive Visualization of Uncertain biochemical reaction Networks.

Vehlow C, Hasenauer J, Kramer A, Raue A, Hug S, Timmer J, Radde N, Theis FJ, Weiskopf D. Vehlow C, et al. Among authors: theis fj. BMC Bioinformatics. 2013;14 Suppl 19(Suppl 19):S2. doi: 10.1186/1471-2105-14-S19-S2. Epub 2013 Nov 12. BMC Bioinformatics. 2013. PMID: 24564335 Free PMC article.

9

ODE constrained mixture modelling: a method for unraveling subpopulation structures and dynamics.

Hasenauer J, Hasenauer C, Hucho T, Theis FJ. Hasenauer J, et al. Among authors: theis fj. PLoS Comput Biol. 2014 Jul 3;10(7):e1003686. doi: 10.1371/journal.pcbi.1003686. eCollection 2014 Jul. PLoS Comput Biol. 2014. PMID: 24992156 Free PMC article.

10

Data2Dynamics: a modeling environment tailored to parameter estimation in dynamical systems.

Raue A, Steiert B, Schelker M, Kreutz C, Maiwald T, Hass H, Vanlier J, Tönsing C, Adlung L, Engesser R, Mader W, Heinemann T, Hasenauer J, Schilling M, Höfer T, Klipp E, Theis F, Klingmüller U, Schöberl B, Timmer J. Raue A, et al. Bioinformatics. 2015 Nov 1;31(21):3558-60. doi: 10.1093/bioinformatics/btv405. Epub 2015 Jul 3. Bioinformatics. 2015. PMID: 26142188

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