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EXACT SPIKE TRAIN INFERENCE VIA ℓ0 OPTIMIZATION.
Jewell S, Witten D. Jewell S, et al. Ann Appl Stat. 2018 Dec;12(4):2457-2482. doi: 10.1214/18-AOAS1162. Epub 2018 Nov 13. Ann Appl Stat. 2018. PMID: 30627301 Free PMC article.
Fast nonconvex deconvolution of calcium imaging data.
Jewell SW, Hocking TD, Fearnhead P, Witten DM. Jewell SW, et al. Biostatistics. 2020 Oct 1;21(4):709-726. doi: 10.1093/biostatistics/kxy083. Biostatistics. 2020. PMID: 30753436 Free PMC article.
While a number of formulations have been proposed for this task in the recent literature, in this article, we focus on a formulation recently proposed in Jewell and Witten (2018. Exact spike train inference via $\ell_{0} $ optimization. The Annals of Applied Statistics12(4 …
While a number of formulations have been proposed for this task in the recent literature, in this article, we focus on a formulation recentl …
A large-scale standardized physiological survey reveals functional organization of the mouse visual cortex.
de Vries SEJ, Lecoq JA, Buice MA, Groblewski PA, Ocker GK, Oliver M, Feng D, Cain N, Ledochowitsch P, Millman D, Roll K, Garrett M, Keenan T, Kuan L, Mihalas S, Olsen S, Thompson C, Wakeman W, Waters J, Williams D, Barber C, Berbesque N, Blanchard B, Bowles N, Caldejon SD, Casal L, Cho A, Cross S, Dang C, Dolbeare T, Edwards M, Galbraith J, Gaudreault N, Gilbert TL, Griffin F, Hargrave P, Howard R, Huang L, Jewell S, Keller N, Knoblich U, Larkin JD, Larsen R, Lau C, Lee E, Lee F, Leon A, Li L, Long F, Luviano J, Mace K, Nguyen T, Perkins J, Robertson M, Seid S, Shea-Brown E, Shi J, Sjoquist N, Slaughterbeck C, Sullivan D, Valenza R, White C, Williford A, Witten DM, Zhuang J, Zeng H, Farrell C, Ng L, Bernard A, Phillips JW, Reid RC, Koch C. de Vries SEJ, et al. Among authors: jewell s. Nat Neurosci. 2020 Jan;23(1):138-151. doi: 10.1038/s41593-019-0550-9. Epub 2019 Dec 16. Nat Neurosci. 2020. PMID: 31844315 Free PMC article.
Inferring spikes from calcium imaging in dopamine neurons.
Fleming W, Jewell S, Engelhard B, Witten DM, Witten IB. Fleming W, et al. Among authors: jewell s. PLoS One. 2021 Jun 4;16(6):e0252345. doi: 10.1371/journal.pone.0252345. eCollection 2021. PLoS One. 2021. PMID: 34086726 Free PMC article.
Testing for a Change in Mean After Changepoint Detection.
Jewell S, Fearnhead P, Witten D. Jewell S, et al. J R Stat Soc Series B Stat Methodol. 2022 Sep;84(4):1082-1104. doi: 10.1111/rssb.12501. Epub 2022 Apr 12. J R Stat Soc Series B Stat Methodol. 2022. PMID: 36419504 Free PMC article.
More Powerful Selective Inference for the Graph Fused Lasso.
Chen Y, Jewell S, Witten D. Chen Y, et al. Among authors: jewell s. J Comput Graph Stat. 2023;32(2):577-587. doi: 10.1080/10618600.2022.2097246. Epub 2022 Sep 6. J Comput Graph Stat. 2023. PMID: 38250478 Free PMC article.
Machine learning-optimized targeted detection of alternative splicing.
Yang K, Islas N, Jewell S, Wu D, Jha A, Radens CM, Pleiss JA, Lynch KW, Barash Y, Choi PS. Yang K, et al. Among authors: jewell s. Nucleic Acids Res. 2024 Dec 27:gkae1260. doi: 10.1093/nar/gkae1260. Online ahead of print. Nucleic Acids Res. 2024. PMID: 39727154
247 results