Oxley D - Search Results

1

Correction to: Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data.

Olova N, Krueger F, Andrews S, Oxley D, Berrens RV, Branco MR, Reik W. Olova N, et al. Among authors: oxley d. Genome Biol. 2019 Feb 22;20(1):43. doi: 10.1186/s13059-019-1656-9. Genome Biol. 2019. PMID: 30795792 Free PMC article.

2

Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data.

Olova N, Krueger F, Andrews S, Oxley D, Berrens RV, Branco MR, Reik W. Olova N, et al. Among authors: oxley d. Genome Biol. 2018 Mar 15;19(1):33. doi: 10.1186/s13059-018-1408-2. Genome Biol. 2018. PMID: 29544553 Free PMC article.

3

FGF signaling inhibition in ESCs drives rapid genome-wide demethylation to the epigenetic ground state of pluripotency.

Ficz G, Hore TA, Santos F, Lee HJ, Dean W, Arand J, Krueger F, Oxley D, Paul YL, Walter J, Cook SJ, Andrews S, Branco MR, Reik W. Ficz G, et al. Among authors: oxley d. Cell Stem Cell. 2013 Sep 5;13(3):351-9. doi: 10.1016/j.stem.2013.06.004. Epub 2013 Jul 11. Cell Stem Cell. 2013. PMID: 23850245 Free PMC article.

4

Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution.

Booth MJ, Branco MR, Ficz G, Oxley D, Krueger F, Reik W, Balasubramanian S. Booth MJ, et al. Among authors: oxley d. Science. 2012 May 18;336(6083):934-7. doi: 10.1126/science.1220671. Epub 2012 Apr 26. Science. 2012. PMID: 22539555

5

DNA methylation profiles define stem cell identity and reveal a tight embryonic-extraembryonic lineage boundary.

Senner CE, Krueger F, Oxley D, Andrews S, Hemberger M. Senner CE, et al. Among authors: oxley d. Stem Cells. 2012 Dec;30(12):2732-45. doi: 10.1002/stem.1249. Stem Cells. 2012. PMID: 23034951

6

Genome-wide distribution of 5-formylcytosine in embryonic stem cells is associated with transcription and depends on thymine DNA glycosylase.

Raiber EA, Beraldi D, Ficz G, Burgess HE, Branco MR, Murat P, Oxley D, Booth MJ, Reik W, Balasubramanian S. Raiber EA, et al. Among authors: oxley d. Genome Biol. 2012 Aug 17;13(8):R69. doi: 10.1186/gb-2012-13-8-r69. Genome Biol. 2012. PMID: 22902005 Free PMC article.

7

Regulation of lineage specific DNA hypomethylation in mouse trophectoderm.

Oda M, Oxley D, Dean W, Reik W. Oda M, et al. Among authors: oxley d. PLoS One. 2013 Jun 25;8(6):e68846. doi: 10.1371/journal.pone.0068846. Print 2013. PLoS One. 2013. PMID: 23825703 Free PMC article.

8

Resetting transcription factor control circuitry toward ground-state pluripotency in human.

Takashima Y, Guo G, Loos R, Nichols J, Ficz G, Krueger F, Oxley D, Santos F, Clarke J, Mansfield W, Reik W, Bertone P, Smith A. Takashima Y, et al. Among authors: oxley d. Cell. 2014 Sep 11;158(6):1254-1269. doi: 10.1016/j.cell.2014.08.029. Cell. 2014. PMID: 25215486 Free PMC article.

9

The Ageing Brain: Effects on DNA Repair and DNA Methylation in Mice.

Langie SA, Cameron KM, Ficz G, Oxley D, Tomaszewski B, Gorniak JP, Maas LM, Godschalk RW, van Schooten FJ, Reik W, von Zglinicki T, Mathers JC. Langie SA, et al. Among authors: oxley d. Genes (Basel). 2017 Feb 17;8(2):75. doi: 10.3390/genes8020075. Genes (Basel). 2017. PMID: 28218666 Free PMC article.

10

The H19 lincRNA is a developmental reservoir of miR-675 that suppresses growth and Igf1r.

Keniry A, Oxley D, Monnier P, Kyba M, Dandolo L, Smits G, Reik W. Keniry A, et al. Among authors: oxley d. Nat Cell Biol. 2012 Jun 10;14(7):659-65. doi: 10.1038/ncb2521. Nat Cell Biol. 2012. PMID: 22684254 Free PMC article.

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