Foster LJ - Search Results

1

Evaluating measures of association for single-cell transcriptomics.

Skinnider MA, Squair JW, Foster LJ. Skinnider MA, et al. Among authors: foster lj. Nat Methods. 2019 May;16(5):381-386. doi: 10.1038/s41592-019-0372-4. Epub 2019 Apr 8. Nat Methods. 2019. PMID: 30962620

2

Isotopic labeling of terminal amines in complex samples identifies protein N-termini and protease cleavage products.

Kleifeld O, Doucet A, auf dem Keller U, Prudova A, Schilling O, Kainthan RK, Starr AE, Foster LJ, Kizhakkedathu JN, Overall CM. Kleifeld O, et al. Among authors: foster lj. Nat Biotechnol. 2010 Mar;28(3):281-8. doi: 10.1038/nbt.1611. Epub 2010 Mar 7. Nat Biotechnol. 2010. PMID: 20208520

3

A high-throughput approach for measuring temporal changes in the interactome.

Kristensen AR, Gsponer J, Foster LJ. Kristensen AR, et al. Among authors: foster lj. Nat Methods. 2012 Sep;9(9):907-9. doi: 10.1038/nmeth.2131. Epub 2012 Aug 5. Nat Methods. 2012. PMID: 22863883 Free PMC article.

4

A Targeted Proteomics Analysis of Cerebrospinal Fluid after Acute Human Spinal Cord Injury.

Streijger F, Skinnider MA, Rogalski JC, Balshaw R, Shannon CP, Prudova A, Belanger L, Ritchie L, Tsang A, Christie S, Parent S, Mac-Thiong JM, Bailey C, Urquhart J, Ailon T, Paquette S, Boyd M, Street J, Fisher CG, Dvorak MF, Borchers CH, Foster LJ, Kwon BK. Streijger F, et al. Among authors: foster lj. J Neurotrauma. 2017 Jun 15;34(12):2054-2068. doi: 10.1089/neu.2016.4879. Epub 2017 Apr 7. J Neurotrauma. 2017. PMID: 28276985

5

A rapid and accurate approach for prediction of interactomes from co-elution data (PrInCE).

Stacey RG, Skinnider MA, Scott NE, Foster LJ. Stacey RG, et al. Among authors: foster lj. BMC Bioinformatics. 2017 Oct 23;18(1):457. doi: 10.1186/s12859-017-1865-8. BMC Bioinformatics. 2017. PMID: 29061110 Free PMC article.

6

Integrated systems analysis reveals conserved gene networks underlying response to spinal cord injury.

Squair JW, Tigchelaar S, Moon KM, Liu J, Tetzlaff W, Kwon BK, Krassioukov AV, West CR, Foster LJ, Skinnider MA. Squair JW, et al. Among authors: foster lj. Elife. 2018 Oct 2;7:e39188. doi: 10.7554/eLife.39188. Elife. 2018. PMID: 30277459 Free PMC article.

7

Genomic data integration systematically biases interactome mapping.

Skinnider MA, Stacey RG, Foster LJ. Skinnider MA, et al. Among authors: foster lj. PLoS Comput Biol. 2018 Oct 17;14(10):e1006474. doi: 10.1371/journal.pcbi.1006474. eCollection 2018 Oct. PLoS Comput Biol. 2018. PMID: 30332399 Free PMC article.

8

Context-specific interactions in literature-curated protein interaction databases.

Stacey RG, Skinnider MA, Chik JHL, Foster LJ. Stacey RG, et al. Among authors: foster lj. BMC Genomics. 2018 Oct 19;19(1):758. doi: 10.1186/s12864-018-5139-2. BMC Genomics. 2018. PMID: 30340458 Free PMC article.

9

Dynamic rewiring of the human interactome by interferon signaling.

Kerr CH, Skinnider MA, Andrews DDT, Madero AM, Chan QWT, Stacey RG, Stoynov N, Jan E, Foster LJ. Kerr CH, et al. Among authors: foster lj. Genome Biol. 2020 Jun 15;21(1):140. doi: 10.1186/s13059-020-02050-y. Genome Biol. 2020. PMID: 32539747 Free PMC article.

10

Cell type prioritization in single-cell data.

Skinnider MA, Squair JW, Kathe C, Anderson MA, Gautier M, Matson KJE, Milano M, Hutson TH, Barraud Q, Phillips AA, Foster LJ, La Manno G, Levine AJ, Courtine G. Skinnider MA, et al. Among authors: foster lj. Nat Biotechnol. 2021 Jan;39(1):30-34. doi: 10.1038/s41587-020-0605-1. Epub 2020 Jul 20. Nat Biotechnol. 2021. PMID: 32690972 Free PMC article.

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