Manninen T - Search Results

1

Cerebellar Purkinje cells control eye movements with a rapid rate code that is invariant to spike irregularity.

Payne HL, French RL, Guo CC, Nguyen-Vu TB, Manninen T, Raymond JL. Payne HL, et al. Among authors: manninen t. Elife. 2019 May 3;8:e37102. doi: 10.7554/eLife.37102. Elife. 2019. PMID: 31050648 Free PMC article.

2

Astrocyte-mediated spike-timing-dependent long-term depression modulates synaptic properties in the developing cortex.

Manninen T, Saudargiene A, Linne ML. Manninen T, et al. PLoS Comput Biol. 2020 Nov 10;16(11):e1008360. doi: 10.1371/journal.pcbi.1008360. eCollection 2020 Nov. PLoS Comput Biol. 2020. PMID: 33170856 Free PMC article.

3

Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures.

Manninen T, Aćimović J, Havela R, Teppola H, Linne ML. Manninen T, et al. Front Neuroinform. 2018 May 1;12:20. doi: 10.3389/fninf.2018.00020. eCollection 2018. Front Neuroinform. 2018. PMID: 29765315 Free PMC article.

4

Simulation tools for biochemical networks: evaluation of performance and usability.

Pettinen A, Aho T, Smolander OP, Manninen T, Saarinen A, Taattola KL, Yli-Harja O, Linne ML. Pettinen A, et al. Among authors: manninen t. Bioinformatics. 2005 Feb 1;21(3):357-63. doi: 10.1093/bioinformatics/bti018. Epub 2004 Sep 9. Bioinformatics. 2005. PMID: 15358616

5

Developing Itô stochastic differential equation models for neuronal signal transduction pathways.

Manninen T, Linne ML, Ruohonen K. Manninen T, et al. Comput Biol Chem. 2006 Aug;30(4):280-91. doi: 10.1016/j.compbiolchem.2006.04.002. Comput Biol Chem. 2006. PMID: 16880117

6

Postsynaptic signal transduction models for long-term potentiation and depression.

Manninen T, Hituri K, Kotaleski JH, Blackwell KT, Linne ML. Manninen T, et al. Front Comput Neurosci. 2010 Dec 13;4:152. doi: 10.3389/fncom.2010.00152. eCollection 2010. Front Comput Neurosci. 2010. PMID: 21188161 Free PMC article.

7

Effects of transmitters and amyloid-beta peptide on calcium signals in rat cortical astrocytes: Fura-2AM measurements and stochastic model simulations.

Toivari E, Manninen T, Nahata AK, Jalonen TO, Linne ML. Toivari E, et al. Among authors: manninen t. PLoS One. 2011 Mar 29;6(3):e17914. doi: 10.1371/journal.pone.0017914. PLoS One. 2011. PMID: 21483471 Free PMC article.

8

Modeling signal transduction leading to synaptic plasticity: evaluation and comparison of five models.

Manninen T, Hituri K, Toivari E, Linne ML. Manninen T, et al. EURASIP J Bioinform Syst Biol. 2011;2011(1):797250. doi: 10.1155/2011/797250. Epub 2011 Mar 29. EURASIP J Bioinform Syst Biol. 2011. PMID: 21559300 Free PMC article.

9

Computational study of noise in a large signal transduction network.

Intosalmi J, Manninen T, Ruohonen K, Linne ML. Intosalmi J, et al. Among authors: manninen t. BMC Bioinformatics. 2011 Jun 21;12:252. doi: 10.1186/1471-2105-12-252. BMC Bioinformatics. 2011. PMID: 21693049 Free PMC article.

10

Reproducibility and Comparability of Computational Models for Astrocyte Calcium Excitability.

Manninen T, Havela R, Linne ML. Manninen T, et al. Front Neuroinform. 2017 Feb 21;11:11. doi: 10.3389/fninf.2017.00011. eCollection 2017. Front Neuroinform. 2017. PMID: 28270761 Free PMC article.

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