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Page 1
Using Genomics to Differentiate Multiple Primaries From Metastatic Lung Cancer.
Murphy SJ, Harris FR, Kosari F, Barreto Siqueira Parrilha Terra S, Nasir A, Johnson SH, Serla V, Smadbeck JB, Halling GC, Karagouga G, Sukov WR, Leventakos K, Yang P, Peikert T, Mansfield AS, Wigle DA, Yi ES, Kipp BR, Vasmatzis G, Aubry MC. Murphy SJ, et al. Among authors: karagouga g. J Thorac Oncol. 2019 Sep;14(9):1567-1582. doi: 10.1016/j.jtho.2019.05.008. Epub 2019 May 16. J Thorac Oncol. 2019. PMID: 31103780 Free article.
Neoantigenic Potential of Complex Chromosomal Rearrangements in Mesothelioma.
Mansfield AS, Peikert T, Smadbeck JB, Udell JBM, Garcia-Rivera E, Elsbernd L, Erskine CL, Van Keulen VP, Kosari F, Murphy SJ, Ren H, Serla VV, Schaefer Klein JL, Karagouga G, Harris FR, Sosa C, Johnson SH, Nevala W, Markovic SN, Bungum AO, Edell ES, Dong H, Cheville JC, Aubry MC, Jen J, Vasmatzis G. Mansfield AS, et al. Among authors: karagouga g. J Thorac Oncol. 2019 Feb;14(2):276-287. doi: 10.1016/j.jtho.2018.10.001. Epub 2018 Oct 10. J Thorac Oncol. 2019. PMID: 30316012 Free PMC article.
Optimizing clinical cytology touch preparations for next generation sequencing.
Murphy SJ, Harris FR, Smadbeck JB, Serla V, Karagouga G, Johnson SH, Kosari F, Pierson KE, Bungum AO, Edell ES, Mansfield AS, Wigle DA, Kipp BR, Vasmatzis G, Aubry MC. Murphy SJ, et al. Among authors: karagouga g. Genomics. 2020 Nov;112(6):5313-5323. doi: 10.1016/j.ygeno.2020.10.031. Epub 2020 Nov 2. Genomics. 2020. PMID: 33144219 Free article.
Chromosomal Junction Detection from Whole-Genome Sequencing on Formalin-Fixed, Paraffin-Embedded Tumors.
Murphy S, Smadbeck J, Eckloff B, Lee Y, Johnson S, Karagouga G, Serla V, Sharma A, Sikkink R, Voss J, Harris F, Kline JS, Kosari F, Feldman A, Wieben E, Aubry MC, Kipp B, Jen J, Cheville J, Vasmatzis G. Murphy S, et al. Among authors: karagouga g. J Mol Diagn. 2021 Apr;23(4):375-388. doi: 10.1016/j.jmoldx.2020.12.006. Epub 2020 Dec 31. J Mol Diagn. 2021. PMID: 33387698 Free article.
Theragnostic chromosomal rearrangements in treatment-naive pancreatic ductal adenocarcinomas obtained via endoscopic ultrasound.
Murphy SJ, Levy MJ, Smadbeck JB, Karagouga G, McCune AF, Harris FR, Udell JB, Johnson SH, Kerr SE, Cheville JC, Kipp BR, Vasmatzis G, Gleeson FC. Murphy SJ, et al. Among authors: karagouga g. J Cell Mol Med. 2021 Apr;25(8):4110-4123. doi: 10.1111/jcmm.16381. Epub 2021 Mar 11. J Cell Mol Med. 2021. PMID: 33704908 Free PMC article.
Composition, diversity and potential utility of intervention-naïve pancreatic cancer intratumoral microbiome signature profiling via endoscopic ultrasound.
Gleeson FC, Jeraldo P, Levy MJ, Murphy SJ, Mendes-Soares H, Karagouga G, Mccune AF, Garcia Garcia Deparedes A, Kipp BR, Song SD, Khanna S, Pardi DS, Chia N. Gleeson FC, et al. Among authors: karagouga g. Gut. 2022 Feb;71(2):441-443. doi: 10.1136/gutjnl-2021-324031. Epub 2021 Mar 22. Gut. 2022. PMID: 33753418 No abstract available.
Personalized tumor-specific DNA junctions to detect circulating tumor in patients with endometrial cancer.
Grassi T, Harris FR, Smadbeck JB, Murphy SJ, Block MS, Multinu F, Schaefer Klein JL, Zhang P, Karagouga G, Liu MC, Larish A, Lemens MA, Sommerfield MKS, Cappuccio S, Cheville JC, Vasmatzis G, Mariani A. Grassi T, et al. Among authors: karagouga g. PLoS One. 2021 Jun 10;16(6):e0252390. doi: 10.1371/journal.pone.0252390. eCollection 2021. PLoS One. 2021. PMID: 34111149 Free PMC article.
Tumor Junction Burden and Antigen Presentation as Predictors of Survival in Mesothelioma Treated With Immune Checkpoint Inhibitors.
Kosari F, Disselhorst M, Yin J, Peikert T, Udell J, Johnson S, Smadbeck J, Murphy S, McCune A, Karagouga G, Desai A, Schaefer-Klein J, Borad MJ, Cheville J, Vasmatzis G, Baas P, Mansfield AS. Kosari F, et al. Among authors: karagouga g. J Thorac Oncol. 2022 Mar;17(3):446-454. doi: 10.1016/j.jtho.2021.10.022. Epub 2021 Nov 17. J Thorac Oncol. 2022. PMID: 34800701 Free PMC article.
Renin Production by Juxtaglomerular Cell Tumors and Clear Cell Renal Cell Carcinoma and the Role of Angiotensin Signaling Inhibitors.
Gupta S, Nichols P, Lohse CM, Kosari F, Kattah AG, Harris FR, Karagouga G, Mehra R, Fine SW, Reuter VE, Herrera-Hernandez L, Zganjar AJ, Britton CJ, Potretzke AM, Boorjian SA, Thompson RH, Jimenez RE, Leibovich BC, Garovic VD, Cheville JC, Sharma V. Gupta S, et al. Among authors: karagouga g. Mayo Clin Proc. 2022 Nov;97(11):2050-2064. doi: 10.1016/j.mayocp.2022.03.034. Epub 2022 Jun 24. Mayo Clin Proc. 2022. PMID: 35753824 Free PMC article.
Epigenomics may begin to explain in vitro differential response to hypomethylating agents in MMR-D hypermethylated endometrial cancer.
El Khoury LY, Lin WH, Smadbeck JB, Barrett MT, Sadeghian D, McCune AF, Karagouga G, Cheville JC, Harris FR, Kinsella LM, Feathers RW, Schafer Klein JL, Walther-Antonio MR, Johnson SH, Penheiter AR, Cucinella G, Schivardi G, Bhagwate A, Borad MJ, Mansfield AS, Murphy SJ, Mariani A, Vasmatzis G, Anastasiadis PZ, Weroha SJ, Larish AM. El Khoury LY, et al. Among authors: karagouga g. Epigenomics. 2023 Mar;15(5):283-292. doi: 10.2217/epi-2023-0026. Epub 2023 May 22. Epigenomics. 2023. PMID: 37212177
13 results