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Structural variants identified by Oxford Nanopore PromethION sequencing of the human genome.
Genome Res. 2019 Jul;29(7):1178-1187. doi: 10.1101/gr.244939.118. Epub 2019 Jun 11.
Genome Res. 2019.
PMID: 31186302
Free PMC article.
NanoSatellite: accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION.
De Roeck A, De Coster W, Bossaerts L, Cacace R, De Pooter T, Van Dongen J, D'Hert S, De Rijk P, Strazisar M, Van Broeckhoven C, Sleegers K.
De Roeck A, et al. Among authors: d hert s.
Genome Biol. 2019 Nov 14;20(1):239. doi: 10.1186/s13059-019-1856-3.
Genome Biol. 2019.
PMID: 31727106
Free PMC article.
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NanoPack: visualizing and processing long-read sequencing data.
De Coster W, D'Hert S, Schultz DT, Cruts M, Van Broeckhoven C.
De Coster W, et al. Among authors: d hert s.
Bioinformatics. 2018 Aug 1;34(15):2666-2669. doi: 10.1093/bioinformatics/bty149.
Bioinformatics. 2018.
PMID: 29547981
Free PMC article.
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Visualization and analysis of medically relevant tandem repeats in nanopore sequencing of control cohorts with pathSTR.
De Coster W, Höijer I, Bruggeman I, D'Hert S, Melin M, Ameur A, Rademakers R.
De Coster W, et al. Among authors: d hert s.
Genome Res. 2024 Nov 20;34(11):2074-2080. doi: 10.1101/gr.279265.124.
Genome Res. 2024.
PMID: 39147583
Free PMC article.
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