Clark NL - Search Results

1

RERconverge: an R package for associating evolutionary rates with convergent traits.

Kowalczyk A, Meyer WK, Partha R, Mao W, Clark NL, Chikina M. Kowalczyk A, et al. Among authors: clark nl. Bioinformatics. 2019 Nov 1;35(22):4815-4817. doi: 10.1093/bioinformatics/btz468. Bioinformatics. 2019. PMID: 31192356 Free PMC article.

2

The center for causal discovery of biomedical knowledge from big data.

Cooper GF, Bahar I, Becich MJ, Benos PV, Berg J, Espino JU, Glymour C, Jacobson RC, Kienholz M, Lee AV, Lu X, Scheines R; Center for Causal Discovery team. Cooper GF, et al. J Am Med Inform Assoc. 2015 Nov;22(6):1132-6. doi: 10.1093/jamia/ocv059. Epub 2015 Jul 2. J Am Med Inform Assoc. 2015. PMID: 26138794 Free PMC article.

3

ERC analysis: web-based inference of gene function via evolutionary rate covariation.

Wolfe NW, Clark NL. Wolfe NW, et al. Among authors: clark nl. Bioinformatics. 2015 Dec 1;31(23):3835-7. doi: 10.1093/bioinformatics/btv454. Epub 2015 Aug 4. Bioinformatics. 2015. PMID: 26243019 Free PMC article.

4

Hundreds of Genes Experienced Convergent Shifts in Selective Pressure in Marine Mammals.

Chikina M, Robinson JD, Clark NL. Chikina M, et al. Among authors: clark nl. Mol Biol Evol. 2016 Sep;33(9):2182-92. doi: 10.1093/molbev/msw112. Epub 2016 Jun 21. Mol Biol Evol. 2016. PMID: 27329977 Free PMC article.

5

Subterranean mammals show convergent regression in ocular genes and enhancers, along with adaptation to tunneling.

Partha R, Chauhan BK, Ferreira Z, Robinson JD, Lathrop K, Nischal KK, Chikina M, Clark NL. Partha R, et al. Among authors: clark nl. Elife. 2017 Oct 16;6:e25884. doi: 10.7554/eLife.25884. Elife. 2017. PMID: 29035697 Free PMC article.

6

Ancient convergent losses of Paraoxonase 1 yield potential risks for modern marine mammals.

Meyer WK, Jamison J, Richter R, Woods SE, Partha R, Kowalczyk A, Kronk C, Chikina M, Bonde RK, Crocker DE, Gaspard J, Lanyon JM, Marsillach J, Furlong CE, Clark NL. Meyer WK, et al. Among authors: clark nl. Science. 2018 Aug 10;361(6402):591-594. doi: 10.1126/science.aap7714. Science. 2018. PMID: 30093596 Free PMC article.

7

Evolutionary rate covariation analysis of E-cadherin identifies Raskol as a regulator of cell adhesion and actin dynamics in Drosophila.

Raza Q, Choi JY, Li Y, O'Dowd RM, Watkins SC, Chikina M, Hong Y, Clark NL, Kwiatkowski AV. Raza Q, et al. Among authors: clark nl. PLoS Genet. 2019 Feb 14;15(2):e1007720. doi: 10.1371/journal.pgen.1007720. eCollection 2019 Feb. PLoS Genet. 2019. PMID: 30763317 Free PMC article.

8

Robust Method for Detecting Convergent Shifts in Evolutionary Rates.

Partha R, Kowalczyk A, Clark NL, Chikina M. Partha R, et al. Among authors: clark nl. Mol Biol Evol. 2019 Aug 1;36(8):1817-1830. doi: 10.1093/molbev/msz107. Mol Biol Evol. 2019. PMID: 31077321 Free PMC article.

9

Convergent evolution in the genomics era: new insights and directions.

Sackton TB, Clark N. Sackton TB, et al. Philos Trans R Soc Lond B Biol Sci. 2019 Jul 22;374(1777):20190102. doi: 10.1098/rstb.2019.0102. Epub 2019 Jun 3. Philos Trans R Soc Lond B Biol Sci. 2019. PMID: 31154976 Free PMC article. No abstract available.

10

Pan-mammalian analysis of molecular constraints underlying extended lifespan.

Kowalczyk A, Partha R, Clark NL, Chikina M. Kowalczyk A, et al. Among authors: clark nl. Elife. 2020 Feb 11;9:e51089. doi: 10.7554/eLife.51089. Elife. 2020. PMID: 32043462 Free PMC article.

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