Wang D - Search Results

1

3.1 Å structure of yeast RNA polymerase II elongation complex stalled at a cyclobutane pyrimidine dimer lesion solved using streptavidin affinity grids.

Lahiri I, Xu J, Han BG, Oh J, Wang D, DiMaio F, Leschziner AE. Lahiri I, et al. Among authors: wang d. J Struct Biol. 2019 Sep 1;207(3):270-278. doi: 10.1016/j.jsb.2019.06.004. Epub 2019 Jun 11. J Struct Biol. 2019. PMID: 31200019 Free PMC article.

2

The splicing factor SC35 has an active role in transcriptional elongation.

Lin S, Coutinho-Mansfield G, Wang D, Pandit S, Fu XD. Lin S, et al. Among authors: wang d. Nat Struct Mol Biol. 2008 Aug;15(8):819-26. doi: 10.1038/nsmb.1461. Epub 2008 Jul 20. Nat Struct Mol Biol. 2008. PMID: 18641664 Free PMC article.

3

Dissecting chemical interactions governing RNA polymerase II transcriptional fidelity.

Kellinger MW, Ulrich S, Chong J, Kool ET, Wang D. Kellinger MW, et al. Among authors: wang d. J Am Chem Soc. 2012 May 16;134(19):8231-40. doi: 10.1021/ja302077d. Epub 2012 May 2. J Am Chem Soc. 2012. PMID: 22509745 Free PMC article.

4

5-formylcytosine and 5-carboxylcytosine reduce the rate and substrate specificity of RNA polymerase II transcription.

Kellinger MW, Song CX, Chong J, Lu XY, He C, Wang D. Kellinger MW, et al. Among authors: wang d. Nat Struct Mol Biol. 2012 Aug;19(8):831-3. doi: 10.1038/nsmb.2346. Epub 2012 Jul 22. Nat Struct Mol Biol. 2012. PMID: 22820989 Free PMC article.

5

Strand-specific (asymmetric) contribution of phosphodiester linkages on RNA polymerase II transcriptional efficiency and fidelity.

Xu L, Zhang L, Chong J, Xu J, Huang X, Wang D. Xu L, et al. Among authors: wang d. Proc Natl Acad Sci U S A. 2014 Aug 12;111(32):E3269-76. doi: 10.1073/pnas.1406234111. Epub 2014 Jul 29. Proc Natl Acad Sci U S A. 2014. PMID: 25074911 Free PMC article.

6

Pyrene-based quantitative detection of the 5-formylcytosine loci symmetry in the CpG duplex content during TET-dependent demethylation.

Xu L, Chen YC, Chong J, Fin A, McCoy LS, Xu J, Zhang C, Wang D. Xu L, et al. Among authors: wang d. Angew Chem Int Ed Engl. 2014 Oct 13;53(42):11223-7. doi: 10.1002/anie.201406220. Epub 2014 Aug 27. Angew Chem Int Ed Engl. 2014. PMID: 25159856 Free PMC article.

7

Impact of template backbone heterogeneity on RNA polymerase II transcription.

Xu L, Wang W, Zhang L, Chong J, Huang X, Wang D. Xu L, et al. Among authors: wang w, wang d. Nucleic Acids Res. 2015 Feb 27;43(4):2232-41. doi: 10.1093/nar/gkv059. Epub 2015 Feb 6. Nucleic Acids Res. 2015. PMID: 25662224 Free PMC article.

8

Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex.

Wang L, Zhou Y, Xu L, Xiao R, Lu X, Chen L, Chong J, Li H, He C, Fu XD, Wang D. Wang L, et al. Among authors: wang d. Nature. 2015 Jul 30;523(7562):621-5. doi: 10.1038/nature14482. Epub 2015 Jun 29. Nature. 2015. PMID: 26123024 Free PMC article.

9

Structural Model of RNA Polymerase II Elongation Complex with Complete Transcription Bubble Reveals NTP Entry Routes.

Zhang L, Silva DA, Pardo-Avila F, Wang D, Huang X. Zhang L, et al. Among authors: wang d. PLoS Comput Biol. 2015 Jul 2;11(7):e1004354. doi: 10.1371/journal.pcbi.1004354. eCollection 2015 Jul. PLoS Comput Biol. 2015. PMID: 26134169 Free PMC article.

10

RNA polymerase II transcriptional fidelity control and its functional interplay with DNA modifications.

Xu L, Wang W, Chong J, Shin JH, Xu J, Wang D. Xu L, et al. Among authors: wang w, wang d. Crit Rev Biochem Mol Biol. 2015;50(6):503-19. doi: 10.3109/10409238.2015.1087960. Epub 2015 Sep 22. Crit Rev Biochem Mol Biol. 2015. PMID: 26392149 Free PMC article. Review.

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