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Page 1
Advances and Applications in the Quest for Orthologs.
Glover N, Dessimoz C, Ebersberger I, Forslund SK, Gabaldón T, Huerta-Cepas J, Martin MJ, Muffato M, Patricio M, Pereira C, da Silva AS, Wang Y, Sonnhammer E, Thomas PD. Glover N, et al. Among authors: gabaldon t. Mol Biol Evol. 2019 Oct 1;36(10):2157-2164. doi: 10.1093/molbev/msz150. Mol Biol Evol. 2019. PMID: 31241141 Free PMC article.
Joining forces in the quest for orthologs.
Gabaldón T, Dessimoz C, Huxley-Jones J, Vilella AJ, Sonnhammer EL, Lewis S. Gabaldón T, et al. Genome Biol. 2009;10(9):403. doi: 10.1186/gb-2009-10-9-403. Epub 2009 Sep 29. Genome Biol. 2009. PMID: 19785718 Free PMC article.
Phylemon 2.0: a suite of web-tools for molecular evolution, phylogenetics, phylogenomics and hypotheses testing.
Sánchez R, Serra F, Tárraga J, Medina I, Carbonell J, Pulido L, de María A, Capella-Gutíerrez S, Huerta-Cepas J, Gabaldón T, Dopazo J, Dopazo H. Sánchez R, et al. Among authors: gabaldon t. Nucleic Acids Res. 2011 Jul;39(Web Server issue):W470-4. doi: 10.1093/nar/gkr408. Epub 2011 Jun 6. Nucleic Acids Res. 2011. PMID: 21646336 Free PMC article.
Toward community standards in the quest for orthologs.
Dessimoz C, Gabaldón T, Roos DS, Sonnhammer EL, Herrero J; Quest for Orthologs Consortium. Dessimoz C, et al. Among authors: gabaldon t. Bioinformatics. 2012 Mar 15;28(6):900-4. doi: 10.1093/bioinformatics/bts050. Epub 2012 Feb 12. Bioinformatics. 2012. PMID: 22332236 Free PMC article.
Comparative transcriptomics of early dipteran development.
Jiménez-Guri E, Huerta-Cepas J, Cozzuto L, Wotton KR, Kang H, Himmelbauer H, Roma G, Gabaldón T, Jaeger J. Jiménez-Guri E, et al. Among authors: gabaldon t. BMC Genomics. 2013 Feb 24;14:123. doi: 10.1186/1471-2164-14-123. BMC Genomics. 2013. PMID: 23432914 Free PMC article.
PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome.
Huerta-Cepas J, Capella-Gutiérrez S, Pryszcz LP, Marcet-Houben M, Gabaldón T. Huerta-Cepas J, et al. Among authors: gabaldon t. Nucleic Acids Res. 2014 Jan;42(Database issue):D897-902. doi: 10.1093/nar/gkt1177. Epub 2013 Nov 25. Nucleic Acids Res. 2014. PMID: 24275491 Free PMC article.
eggNOG v4.0: nested orthology inference across 3686 organisms.
Powell S, Forslund K, Szklarczyk D, Trachana K, Roth A, Huerta-Cepas J, Gabaldón T, Rattei T, Creevey C, Kuhn M, Jensen LJ, von Mering C, Bork P. Powell S, et al. Among authors: gabaldon t. Nucleic Acids Res. 2014 Jan;42(Database issue):D231-9. doi: 10.1093/nar/gkt1253. Epub 2013 Dec 1. Nucleic Acids Res. 2014. PMID: 24297252 Free PMC article.
Big data and other challenges in the quest for orthologs.
Sonnhammer EL, Gabaldón T, Sousa da Silva AW, Martin M, Robinson-Rechavi M, Boeckmann B, Thomas PD, Dessimoz C; Quest for Orthologs consortium. Sonnhammer EL, et al. Among authors: gabaldon t. Bioinformatics. 2014 Nov 1;30(21):2993-8. doi: 10.1093/bioinformatics/btu492. Epub 2014 Jul 26. Bioinformatics. 2014. PMID: 25064571 Free PMC article.
332 results