Bushman FD - Search Results

1

Upper Respiratory Dysbiosis with a Facultative-dominated Ecotype in Advanced Lung Disease and Dynamic Change after Lung Transplant.

Simon-Soro A, Sohn MB, McGinniss JE, Imai I, Brown MC, Knecht VR, Bailey A, Clarke EL, Cantu E, Li H, Bittinger K, Diamond JM, Christie JD, Bushman FD, Collman RG. Simon-Soro A, et al. Among authors: bushman fd. Ann Am Thorac Soc. 2019 Nov;16(11):1383-1391. doi: 10.1513/AnnalsATS.201904-299OC. Ann Am Thorac Soc. 2019. PMID: 31415219 Free PMC article.

2

Community-wide response of the gut microbiota to enteropathogenic Citrobacter rodentium infection revealed by deep sequencing.

Hoffmann C, Hill DA, Minkah N, Kirn T, Troy A, Artis D, Bushman F. Hoffmann C, et al. Infect Immun. 2009 Oct;77(10):4668-78. doi: 10.1128/IAI.00493-09. Epub 2009 Jul 27. Infect Immun. 2009. PMID: 19635824 Free PMC article.

3

Sampling and pyrosequencing methods for characterizing bacterial communities in the human gut using 16S sequence tags.

Wu GD, Lewis JD, Hoffmann C, Chen YY, Knight R, Bittinger K, Hwang J, Chen J, Berkowsky R, Nessel L, Li H, Bushman FD. Wu GD, et al. Among authors: bushman fd. BMC Microbiol. 2010 Jul 30;10:206. doi: 10.1186/1471-2180-10-206. BMC Microbiol. 2010. PMID: 20673359 Free PMC article.

4

Disordered microbial communities in the upper respiratory tract of cigarette smokers.

Charlson ES, Chen J, Custers-Allen R, Bittinger K, Li H, Sinha R, Hwang J, Bushman FD, Collman RG. Charlson ES, et al. Among authors: bushman fd. PLoS One. 2010 Dec 20;5(12):e15216. doi: 10.1371/journal.pone.0015216. PLoS One. 2010. PMID: 21188149 Free PMC article.

5

Topographical continuity of bacterial populations in the healthy human respiratory tract.

Charlson ES, Bittinger K, Haas AR, Fitzgerald AS, Frank I, Yadav A, Bushman FD, Collman RG. Charlson ES, et al. Among authors: bushman fd. Am J Respir Crit Care Med. 2011 Oct 15;184(8):957-63. doi: 10.1164/rccm.201104-0655OC. Epub 2011 Jun 16. Am J Respir Crit Care Med. 2011. PMID: 21680950 Free PMC article.

6

Switching between raltegravir resistance pathways analyzed by deep sequencing.

Mukherjee R, Jensen ST, Male F, Bittinger K, Hodinka RL, Miller MD, Bushman FD. Mukherjee R, et al. Among authors: bushman fd. AIDS. 2011 Oct 23;25(16):1951-9. doi: 10.1097/QAD.0b013e32834b34de. AIDS. 2011. PMID: 21832937 Free PMC article.

7

The human gut virome: inter-individual variation and dynamic response to diet.

Minot S, Sinha R, Chen J, Li H, Keilbaugh SA, Wu GD, Lewis JD, Bushman FD. Minot S, et al. Among authors: bushman fd. Genome Res. 2011 Oct;21(10):1616-25. doi: 10.1101/gr.122705.111. Epub 2011 Aug 31. Genome Res. 2011. PMID: 21880779 Free PMC article.

8

Linking long-term dietary patterns with gut microbial enterotypes.

Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, Li H, Bushman FD, Lewis JD. Wu GD, et al. Among authors: bushman fd. Science. 2011 Oct 7;334(6052):105-8. doi: 10.1126/science.1208344. Epub 2011 Sep 1. Science. 2011. PMID: 21885731 Free PMC article. Clinical Trial.

9

Innate lymphoid cells promote anatomical containment of lymphoid-resident commensal bacteria.

Sonnenberg GF, Monticelli LA, Alenghat T, Fung TC, Hutnick NA, Kunisawa J, Shibata N, Grunberg S, Sinha R, Zahm AM, Tardif MR, Sathaliyawala T, Kubota M, Farber DL, Collman RG, Shaked A, Fouser LA, Weiner DB, Tessier PA, Friedman JR, Kiyono H, Bushman FD, Chang KM, Artis D. Sonnenberg GF, et al. Among authors: bushman fd. Science. 2012 Jun 8;336(6086):1321-5. doi: 10.1126/science.1222551. Epub 2012 Jun 6. Science. 2012. PMID: 22674331 Free PMC article.

10

Associating microbiome composition with environmental covariates using generalized UniFrac distances.

Chen J, Bittinger K, Charlson ES, Hoffmann C, Lewis J, Wu GD, Collman RG, Bushman FD, Li H. Chen J, et al. Among authors: bushman fd. Bioinformatics. 2012 Aug 15;28(16):2106-13. doi: 10.1093/bioinformatics/bts342. Epub 2012 Jun 17. Bioinformatics. 2012. PMID: 22711789 Free PMC article.

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