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NET-CAGE characterizes the dynamics and topology of human transcribed cis-regulatory elements.
Hirabayashi S, Bhagat S, Matsuki Y, Takegami Y, Uehata T, Kanemaru A, Itoh M, Shirakawa K, Takaori-Kondo A, Takeuchi O, Carninci P, Katayama S, Hayashizaki Y, Kere J, Kawaji H, Murakawa Y. Hirabayashi S, et al. Among authors: shirakawa k. Nat Genet. 2019 Sep;51(9):1369-1379. doi: 10.1038/s41588-019-0485-9. Epub 2019 Sep 2. Nat Genet. 2019. PMID: 31477927
Ubiquitination of APOBEC3 proteins by the Vif-Cullin5-ElonginB-ElonginC complex.
Shirakawa K, Takaori-Kondo A, Kobayashi M, Tomonaga M, Izumi T, Fukunaga K, Sasada A, Abudu A, Miyauchi Y, Akari H, Iwai K, Uchiyama T. Shirakawa K, et al. Virology. 2006 Jan 20;344(2):263-6. doi: 10.1016/j.virol.2005.10.028. Epub 2005 Nov 21. Virology. 2006. PMID: 16303161 Free article.
HIV-1 viral infectivity factor interacts with TP53 to induce G2 cell cycle arrest and positively regulate viral replication.
Izumi T, Io K, Matsui M, Shirakawa K, Shinohara M, Nagai Y, Kawahara M, Kobayashi M, Kondoh H, Misawa N, Koyanagi Y, Uchiyama T, Takaori-Kondo A. Izumi T, et al. Among authors: shirakawa k. Proc Natl Acad Sci U S A. 2010 Nov 30;107(48):20798-803. doi: 10.1073/pnas.1008076107. Epub 2010 Nov 11. Proc Natl Acad Sci U S A. 2010. PMID: 21071676 Free PMC article.
Classical NF-κB pathway is responsible for APOBEC3B expression in cancer cells.
Maruyama W, Shirakawa K, Matsui H, Matsumoto T, Yamazaki H, Sarca AD, Kazuma Y, Kobayashi M, Shindo K, Takaori-Kondo A. Maruyama W, et al. Among authors: shirakawa k. Biochem Biophys Res Commun. 2016 Sep 23;478(3):1466-71. doi: 10.1016/j.bbrc.2016.08.148. Epub 2016 Aug 27. Biochem Biophys Res Commun. 2016. PMID: 27577680 Free article.
414 results