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Locality-sensitive hashing for the edit distance.
Marçais G, DeBlasio D, Pandey P, Kingsford C. Marçais G, et al. Bioinformatics. 2019 Jul 15;35(14):i127-i135. doi: 10.1093/bioinformatics/btz354. Bioinformatics. 2019. PMID: 31510667 Free PMC article.
Parsimonious reconstruction of network evolution.
Patro R, Sefer E, Malin J, Marçais G, Navlakha S, Kingsford C. Patro R, et al. Among authors: marcais g. Algorithms Mol Biol. 2012 Sep 19;7(1):25. doi: 10.1186/1748-7188-7-25. Algorithms Mol Biol. 2012. PMID: 22992218 Free PMC article.
The MaSuRCA genome assembler.
Zimin AV, Marçais G, Puiu D, Roberts M, Salzberg SL, Yorke JA. Zimin AV, et al. Among authors: marcais g. Bioinformatics. 2013 Nov 1;29(21):2669-77. doi: 10.1093/bioinformatics/btt476. Epub 2013 Aug 29. Bioinformatics. 2013. PMID: 23990416 Free PMC article.
Improving the performance of minimizers and winnowing schemes.
Marçais G, Pellow D, Bork D, Orenstein Y, Shamir R, Kingsford C. Marçais G, et al. Bioinformatics. 2017 Jul 15;33(14):i110-i117. doi: 10.1093/bioinformatics/btx235. Bioinformatics. 2017. PMID: 28881970 Free PMC article.
Asymptotically optimal minimizers schemes.
Marçais G, DeBlasio D, Kingsford C. Marçais G, et al. Bioinformatics. 2018 Jul 1;34(13):i13-i22. doi: 10.1093/bioinformatics/bty258. Bioinformatics. 2018. PMID: 29949995 Free PMC article.
Improved design and analysis of practical minimizers.
Zheng H, Kingsford C, Marçais G. Zheng H, et al. Among authors: marcais g. Bioinformatics. 2020 Jul 1;36(Suppl_1):i119-i127. doi: 10.1093/bioinformatics/btaa472. Bioinformatics. 2020. PMID: 32657376 Free PMC article.
32 results