Chan D - Search Results

1

Functional Conservation of LncRNA JPX Despite Sequence and Structural Divergence.

Karner H, Webb CH, Carmona S, Liu Y, Lin B, Erhard M, Chan D, Baldi P, Spitale RC, Sun S. Karner H, et al. Among authors: chan d. J Mol Biol. 2020 Jan 17;432(2):283-300. doi: 10.1016/j.jmb.2019.09.002. Epub 2019 Sep 10. J Mol Biol. 2020. PMID: 31518612

2

RNA structure: merging chemistry and genomics for a holistic perspective.

Kubota M, Chan D, Spitale RC. Kubota M, et al. Among authors: chan d. Bioessays. 2015 Oct;37(10):1129-38. doi: 10.1002/bies.201300146. Epub 2015 Aug 19. Bioessays. 2015. PMID: 26288173 Review.

3

Assaying RNA Structure Inside Living Cells with SHAPE.

Feng C, Chan D, Spitale RC. Feng C, et al. Among authors: chan d. Methods Mol Biol. 2017;1648:247-256. doi: 10.1007/978-1-4939-7204-3_18. Methods Mol Biol. 2017. PMID: 28766302

4

Measuring RNA structure transcriptome-wide with icSHAPE.

Chan D, Feng C, Spitale RC. Chan D, et al. Methods. 2017 May 1;120:85-90. doi: 10.1016/j.ymeth.2017.02.010. Epub 2017 Mar 20. Methods. 2017. PMID: 28336307 Free PMC article. Review.

5

Defining Functional Structured RNA inside Living Cells.

Chan D, Spitale RC. Chan D, et al. Biochemistry. 2017 Nov 7;56(44):5847-5848. doi: 10.1021/acs.biochem.7b00816. Biochemistry. 2017. PMID: 29064690 No abstract available.

6

Light-activated chemical probing of nucleobase solvent accessibility inside cells.

Feng C, Chan D, Joseph J, Muuronen M, Coldren WH, Dai N, Corrêa IR Jr, Furche F, Hadad CM, Spitale RC. Feng C, et al. Among authors: chan d. Nat Chem Biol. 2018 Mar;14(3):276-283. doi: 10.1038/nchembio.2548. Epub 2018 Jan 15. Nat Chem Biol. 2018. PMID: 29334380 Free PMC article.

7

Facile synthesis and evaluation of a dual-functioning furoyl probe for in-cell SHAPE.

Chan D, Beasley S, Zhen Y, Spitale RC. Chan D, et al. Bioorg Med Chem Lett. 2018 Feb 15;28(4):601-605. doi: 10.1016/j.bmcl.2018.01.042. Epub 2018 Feb 1. Bioorg Med Chem Lett. 2018. PMID: 29398542 Free PMC article.

8

Assaying RNA structure with LASER-Seq.

Zinshteyn B, Chan D, England W, Feng C, Green R, Spitale RC. Zinshteyn B, et al. Among authors: chan d. Nucleic Acids Res. 2019 Jan 10;47(1):43-55. doi: 10.1093/nar/gky1172. Nucleic Acids Res. 2019. PMID: 30476193 Free PMC article.

9

Comparative Analysis Reveals Furoyl in Vivo Selective Hydroxyl Acylation Analyzed by Primer Extension Reagents Form Stable Ribosyl Ester Adducts.

Chan D, Feng C, Zhen Y, Flynn RA, Spitale RC. Chan D, et al. Biochemistry. 2017 Apr 4;56(13):1811-1814. doi: 10.1021/acs.biochem.7b00128. Epub 2017 Mar 21. Biochemistry. 2017. PMID: 28319368 Free PMC article.

10

Diverse functional elements in RNA predicted transcriptome-wide by orthogonal RNA structure probing.

Chan D, Feng C, England WE, Wyman D, Flynn RA, Wang X, Shi Y, Mortazavi A, Spitale RC. Chan D, et al. Nucleic Acids Res. 2021 Nov 18;49(20):11868-11882. doi: 10.1093/nar/gkab885. Nucleic Acids Res. 2021. PMID: 34634799 Free PMC article.

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