Ye C - Search Results

1

scDAPA: detection and visualization of dynamic alternative polyadenylation from single cell RNA-seq data.

Ye C, Zhou Q, Wu X, Yu C, Ji G, Saban DR, Li QQ. Ye C, et al. Bioinformatics. 2020 Feb 15;36(4):1262-1264. doi: 10.1093/bioinformatics/btz701. Bioinformatics. 2020. PMID: 31557285 Free PMC article.

2

Determinants of public T cell responses.

Li H, Ye C, Ji G, Han J. Li H, et al. Among authors: ye c. Cell Res. 2012 Jan;22(1):33-42. doi: 10.1038/cr.2012.1. Epub 2012 Jan 3. Cell Res. 2012. PMID: 22212481 Free PMC article. Review.

3

Recombinatorial biases and convergent recombination determine interindividual TCRβ sharing in murine thymocytes.

Li H, Ye C, Ji G, Wu X, Xiang Z, Li Y, Cao Y, Liu X, Douek DC, Price DA, Han J. Li H, et al. Among authors: ye c. J Immunol. 2012 Sep 1;189(5):2404-13. doi: 10.4049/jimmunol.1102087. Epub 2012 Jul 23. J Immunol. 2012. PMID: 22826324

4

detectIR: a novel program for detecting perfect and imperfect inverted repeats using complex numbers and vector calculation.

Ye C, Ji G, Li L, Liang C. Ye C, et al. PLoS One. 2014 Nov 19;9(11):e113349. doi: 10.1371/journal.pone.0113349. eCollection 2014. PLoS One. 2014. PMID: 25409465 Free PMC article.

5

PlantOrDB: a genome-wide ortholog database for land plants and green algae.

Li L, Ji G, Ye C, Shu C, Zhang J, Liang C. Li L, et al. Among authors: ye c. BMC Plant Biol. 2015 Jun 26;15:161. doi: 10.1186/s12870-015-0531-4. BMC Plant Biol. 2015. PMID: 26112452 Free PMC article.

6

detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes.

Ye C, Ji G, Liang C. Ye C, et al. Sci Rep. 2016 Jan 22;6:19688. doi: 10.1038/srep19688. Sci Rep. 2016. PMID: 26795595 Free PMC article.

7

Genome-Wide Comparative Analysis of Miniature Inverted Repeat Transposable Elements in 19 Arabidopsis thaliana Ecotype Accessions.

Guo C, Spinelli M, Ye C, Li QQ, Liang C. Guo C, et al. Among authors: ye c. Sci Rep. 2017 Jun 1;7(1):2634. doi: 10.1038/s41598-017-02855-1. Sci Rep. 2017. PMID: 28572566 Free PMC article.

8

PAcluster: Clustering polyadenylation site data using canonical correlation analysis.

Ji G, Lin Q, Long Y, Ye C, Ye W, Wu X. Ji G, et al. Among authors: ye c, ye w. J Bioinform Comput Biol. 2017 Oct;15(5):1750018. doi: 10.1142/S0219720017500184. Epub 2017 Aug 16. J Bioinform Comput Biol. 2017. PMID: 28874086

9

AEGS: identifying aberrantly expressed gene sets for differential variability analysis.

Guan J, Chen M, Ye C, Cai JJ, Ji G. Guan J, et al. Among authors: ye c. Bioinformatics. 2018 Mar 1;34(5):881-883. doi: 10.1093/bioinformatics/btx646. Bioinformatics. 2018. PMID: 29040376 Free PMC article.

10

Alternative polyadenylation is involved in auxin-based plant growth and development.

Hong L, Ye C, Lin J, Fu H, Wu X, Li QQ. Hong L, et al. Among authors: ye c. Plant J. 2018 Jan;93(2):246-258. doi: 10.1111/tpj.13771. Epub 2017 Dec 18. Plant J. 2018. PMID: 29155478 Free article.

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