Giannakoulias S - Search Results

1

Synergistic mutations in soluble guanylyl cyclase (sGC) reveal a key role for interfacial regions in the sGC activation mechanism.

Childers KC, Yao XQ, Giannakoulias S, Amason J, Hamelberg D, Garcin ED. Childers KC, et al. Among authors: giannakoulias s. J Biol Chem. 2019 Nov 29;294(48):18451-18464. doi: 10.1074/jbc.RA119.011010. Epub 2019 Oct 23. J Biol Chem. 2019. PMID: 31645439 Free PMC article.

2

Rosetta Machine Learning Models Accurately Classify Positional Effects of Thioamides on Proteolysis.

Giannakoulias S, Shringari SR, Liu C, Phan HAT, Barrett TM, Ferrie JJ, Petersson EJ. Giannakoulias S, et al. J Phys Chem B. 2020 Sep 17;124(37):8032-8041. doi: 10.1021/acs.jpcb.0c05981. Epub 2020 Sep 1. J Phys Chem B. 2020. PMID: 32869996 Free PMC article.

3

Studies of Thioamide Effects on Serine Protease Activity Enable Two-Site Stabilization of Cancer Imaging Peptides.

Barrett TM, Chen XS, Liu C, Giannakoulias S, Phan HAT, Wang J, Keenan EK, Karpowicz RJ Jr, Petersson EJ. Barrett TM, et al. Among authors: giannakoulias s. ACS Chem Biol. 2020 Mar 20;15(3):774-779. doi: 10.1021/acschembio.9b01036. Epub 2020 Mar 6. ACS Chem Biol. 2020. PMID: 32141733 Free PMC article.

4

Correction to Studies of Thioamide Effects on Serine Protease Activity Enable Two-Site Stabilization of Cancer Imaging Peptides.

Barrett TM, Chen XS, Liu C, Giannakoulias S, Phan HAT, Wang J, Keenan EK, Karpowicz RJ Jr, Petersson EJ. Barrett TM, et al. Among authors: giannakoulias s. ACS Chem Biol. 2020 Sep 18;15(9):2616. doi: 10.1021/acschembio.0c00643. Epub 2020 Aug 31. ACS Chem Biol. 2020. PMID: 32865970 No abstract available.

5

Rational design of thioamide peptides as selective inhibitors of cysteine protease cathepsin L.

Phan HAT, Giannakoulias SG, Barrett TM, Liu C, Petersson EJ. Phan HAT, et al. Among authors: giannakoulias sg. Chem Sci. 2021 Jul 19;12(32):10825-10835. doi: 10.1039/d1sc00785h. eCollection 2021 Aug 18. Chem Sci. 2021. PMID: 35355937 Free PMC article.

6

A "Clickable" Photoconvertible Small Fluorescent Molecule as a Minimalist Probe for Tracking Individual Biomolecule Complexes.

Jun JV, Haney CM, Karpowicz RJ Jr, Giannakoulias S, Lee VM, Petersson EJ, Chenoweth DM. Jun JV, et al. Among authors: giannakoulias s. J Am Chem Soc. 2019 Feb 6;141(5):1893-1897. doi: 10.1021/jacs.8b13094. Epub 2019 Jan 28. J Am Chem Soc. 2019. PMID: 30657670 Free PMC article.

7

Structural impact of thioamide incorporation into a β-hairpin.

Fiore KE, Patist MJ, Giannakoulias S, Huang CH, Verma H, Khatri B, Cheng RP, Chatterjee J, Petersson EJ. Fiore KE, et al. Among authors: giannakoulias s. RSC Chem Biol. 2022 Apr 5;3(5):582-591. doi: 10.1039/d1cb00229e. eCollection 2022 May 11. RSC Chem Biol. 2022. PMID: 35656485 Free PMC article.

8

Rosetta custom score functions accurately predict ΔΔG of mutations at protein-protein interfaces using machine learning.

Shringari SR , Giannakoulias S , Ferrie JJ , Petersson EJ . Shringari SR , et al. Among authors: giannakoulias s. Chem Commun (Camb). 2020 Jun 25;56(50):6774-6777. doi: 10.1039/d0cc01959c. Epub 2020 May 22. Chem Commun (Camb). 2020. PMID: 32441721

9

Correction: Rosetta custom score functions accurately predict ΔΔG of mutations at protein-protein interfaces using machine learning.

Shringari SR, Giannakoulias S, Ferrie JJ, Petersson EJ. Shringari SR, et al. Among authors: giannakoulias s. Chem Commun (Camb). 2020 Sep 14;56(71):10377. doi: 10.1039/d0cc90361b. Epub 2020 Aug 26. Chem Commun (Camb). 2020. PMID: 32845263

10

Identification of a nanomolar affinity α-synuclein fibril imaging probe by ultra-high throughput in silico screening.

Ferrie JJ, Lengyel-Zhand Z, Janssen B, Lougee MG, Giannakoulias S, Hsieh CJ, Pagar VV, Weng CC, Xu H, Graham TJA, Lee VM, Mach RH, Petersson EJ. Ferrie JJ, et al. Among authors: giannakoulias s. Chem Sci. 2020 Sep 10;11(47):12746-12754. doi: 10.1039/d0sc02159h. eCollection 2020 Dec 21. Chem Sci. 2020. PMID: 33889379 Free PMC article.

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