Danko CG - Search Results

1

Parallel evolution of ancient, pleiotropic enhancers underlies butterfly wing pattern mimicry.

Lewis JJ, Geltman RC, Pollak PC, Rondem KE, Van Belleghem SM, Hubisz MJ, Munn PR, Zhang L, Benson C, Mazo-Vargas A, Danko CG, Counterman BA, Papa R, Reed RD. Lewis JJ, et al. Among authors: danko cg. Proc Natl Acad Sci U S A. 2019 Nov 26;116(48):24174-24183. doi: 10.1073/pnas.1907068116. Epub 2019 Nov 11. Proc Natl Acad Sci U S A. 2019. PMID: 31712408 Free PMC article.

2

Bayesian inference of ancient human demography from individual genome sequences.

Gronau I, Hubisz MJ, Gulko B, Danko CG, Siepel A. Gronau I, et al. Among authors: danko cg. Nat Genet. 2011 Sep 18;43(10):1031-4. doi: 10.1038/ng.937. Nat Genet. 2011. PMID: 21926973 Free PMC article.

3

Contrasting Roles of Transcription Factors Spineless and EcR in the Highly Dynamic Chromatin Landscape of Butterfly Wing Metamorphosis.

van der Burg KRL, Lewis JJ, Martin A, Nijhout HF, Danko CG, Reed RD. van der Burg KRL, et al. Among authors: danko cg. Cell Rep. 2019 Apr 23;27(4):1027-1038.e3. doi: 10.1016/j.celrep.2019.03.092. Cell Rep. 2019. PMID: 31018121 Free article.

4

Chromatin conformation remains stable upon extensive transcriptional changes driven by heat shock.

Ray J, Munn PR, Vihervaara A, Lewis JJ, Ozer A, Danko CG, Lis JT. Ray J, et al. Among authors: danko cg. Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19431-19439. doi: 10.1073/pnas.1901244116. Epub 2019 Sep 10. Proc Natl Acad Sci U S A. 2019. PMID: 31506350 Free PMC article.

5

Many functionally connected loci foster adaptive diversification along a neotropical hybrid zone.

Lewis JJ, Van Belleghem SM, Papa R, Danko CG, Reed RD. Lewis JJ, et al. Among authors: danko cg. Sci Adv. 2020 Sep 25;6(39):eabb8617. doi: 10.1126/sciadv.abb8617. Print 2020 Sep. Sci Adv. 2020. PMID: 32978147 Free PMC article.

6

The Dryas iulia Genome Supports Multiple Gains of a W Chromosome from a B Chromosome in Butterflies.

Lewis JJ, Cicconardi F, Martin SH, Reed RD, Danko CG, Montgomery SH. Lewis JJ, et al. Among authors: danko cg. Genome Biol Evol. 2021 Jul 6;13(7):evab128. doi: 10.1093/gbe/evab128. Genome Biol Evol. 2021. PMID: 34117762 Free PMC article.

7

Chromosome Fusion Affects Genetic Diversity and Evolutionary Turnover of Functional Loci but Consistently Depends on Chromosome Size.

Cicconardi F, Lewis JJ, Martin SH, Reed RD, Danko CG, Montgomery SH. Cicconardi F, et al. Among authors: danko cg. Mol Biol Evol. 2021 Sep 27;38(10):4449-4462. doi: 10.1093/molbev/msab185. Mol Biol Evol. 2021. PMID: 34146107 Free PMC article.

8

Multiple stages of evolutionary change in anthrax toxin receptor expression in humans.

Choate LA, Barshad G, McMahon PW, Said I, Rice EJ, Munn PR, Lewis JJ, Danko CG. Choate LA, et al. Among authors: danko cg. Nat Commun. 2021 Nov 15;12(1):6590. doi: 10.1038/s41467-021-26854-z. Nat Commun. 2021. PMID: 34782625 Free PMC article.

9

Darwinian genomics and diversity in the tree of life.

Stephan T, Burgess SM, Cheng H, Danko CG, Gill CA, Jarvis ED, Koepfli KP, Koltes JE, Lyons E, Ronald P, Ryder OA, Schriml LM, Soltis P, VandeWoude S, Zhou H, Ostrander EA, Karlsson EK. Stephan T, et al. Among authors: danko cg. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2115644119. doi: 10.1073/pnas.2115644119. Proc Natl Acad Sci U S A. 2022. PMID: 35042807 Free PMC article.

10

Analysis of nascent RNA identifies a unified architecture of initiation regions at mammalian promoters and enhancers.

Core LJ, Martins AL, Danko CG, Waters CT, Siepel A, Lis JT. Core LJ, et al. Among authors: danko cg. Nat Genet. 2014 Dec;46(12):1311-20. doi: 10.1038/ng.3142. Epub 2014 Nov 10. Nat Genet. 2014. PMID: 25383968 Free PMC article.

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