Greally J - Search Results

1

Transposable element expression in tumors is associated with immune infiltration and increased antigenicity.

Kong Y, Rose CM, Cass AA, Williams AG, Darwish M, Lianoglou S, Haverty PM, Tong AJ, Blanchette C, Albert ML, Mellman I, Bourgon R, Greally J, Jhunjhunwala S, Chen-Harris H. Kong Y, et al. Among authors: greally j. Nat Commun. 2019 Nov 19;10(1):5228. doi: 10.1038/s41467-019-13035-2. Nat Commun. 2019. PMID: 31745090 Free PMC article.

2

Sexual dimorphism in epigenomic responses of stem cells to extreme fetal growth.

Delahaye F, Wijetunga NA, Heo HJ, Tozour JN, Zhao YM, Greally JM, Einstein FH. Delahaye F, et al. Among authors: greally jm. Nat Commun. 2014 Oct 10;5:5187. doi: 10.1038/ncomms6187. Nat Commun. 2014. PMID: 25300954 Free PMC article.

3

The meta-epigenomic structure of purified human stem cell populations is defined at cis-regulatory sequences.

Wijetunga NA, Delahaye F, Zhao YM, Golden A, Mar JC, Einstein FH, Greally JM. Wijetunga NA, et al. Nat Commun. 2014 Oct 20;5:5195. doi: 10.1038/ncomms6195. Nat Commun. 2014. PMID: 25327398 Free PMC article.

4

Detecting, quantifying, and discriminating the mechanism of mosaic chromosomal aneuploidies using MAD-seq.

Kong Y, Berko ER, Marcketta A, Maqbool SB, Simões-Pires CA, Kronn DF, Ye KQ, Suzuki M, Auton A, Greally JM. Kong Y, et al. Genome Res. 2018 Jul;28(7):1039-1052. doi: 10.1101/gr.226282.117. Epub 2018 May 17. Genome Res. 2018. PMID: 29773658 Free PMC article.

5

Insights from deconvolution of cell subtype proportions enhance the interpretation of functional genomic data.

Kong Y, Rastogi D, Seoighe C, Greally JM, Suzuki M. Kong Y, et al. PLoS One. 2019 Apr 25;14(4):e0215987. doi: 10.1371/journal.pone.0215987. eCollection 2019. PLoS One. 2019. PMID: 31022271 Free PMC article.

6

Functional genetic variants can mediate their regulatory effects through alteration of transcription factor binding.

Johnston AD, Simões-Pires CA, Thompson TV, Suzuki M, Greally JM. Johnston AD, et al. Nat Commun. 2019 Aug 2;10(1):3472. doi: 10.1038/s41467-019-11412-5. Nat Commun. 2019. PMID: 31375681 Free PMC article.

7

Genomic insights into host and parasite interactions during intracellular infection by Toxoplasma gondii.

Ulahannan N, Cutler R, Doña-Termine R, Simões-Pires CA, Wijetunga NA, Croken MM, Johnston AD, Kong Y, Maqbool SB, Suzuki M, Greally JM. Ulahannan N, et al. PLoS One. 2022 Sep 30;17(9):e0275226. doi: 10.1371/journal.pone.0275226. eCollection 2022. PLoS One. 2022. PMID: 36178892 Free PMC article.

8

Epigenomics: beyond CpG islands.

Fazzari MJ, Greally JM. Fazzari MJ, et al. Among authors: greally jm. Nat Rev Genet. 2004 Jun;5(6):446-55. doi: 10.1038/nrg1349. Nat Rev Genet. 2004. PMID: 15153997 Review. No abstract available.

9

Journal club. A biologist considers a link between jumping genes and immune-system enzymes.

Greally J. Greally J. Nature. 2008 Dec 4;456(7222):549. doi: 10.1038/456549e. Nature. 2008. PMID: 19052582 No abstract available.

10

Aberrant DNA methylation in malignant melanoma.

Schinke C, Mo Y, Yu Y, Amiri K, Sosman J, Greally J, Verma A. Schinke C, et al. Among authors: greally j. Melanoma Res. 2010 Aug;20(4):253-65. doi: 10.1097/CMR.0b013e328338a35a. Melanoma Res. 2010. PMID: 20418788 Free PMC article. Review.

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