Söderbom F - Search Results

1

Investigation of the host transcriptional response to intracellular bacterial infection using Dictyostelium discoideum as a host model.

Kjellin J, Pränting M, Bach F, Vaid R, Edelbroek B, Li Z, Hoeppner MP, Grabherr M, Isberg RR, Hagedorn M, Söderbom F. Kjellin J, et al. Among authors: soderbom f. BMC Genomics. 2019 Dec 10;20(1):961. doi: 10.1186/s12864-019-6269-x. BMC Genomics. 2019. PMID: 31823727 Free PMC article.

2

Novel non-coding RNAs in Dictyostelium discoideum and their expression during development.

Aspegren A, Hinas A, Larsson P, Larsson A, Söderbom F. Aspegren A, et al. Among authors: soderbom f. Nucleic Acids Res. 2004 Aug 27;32(15):4646-56. doi: 10.1093/nar/gkh804. Print 2004. Nucleic Acids Res. 2004. PMID: 15333696 Free PMC article.

3

Transcriptional changes in Giardia during host-parasite interactions.

Ringqvist E, Avesson L, Söderbom F, Svärd SG. Ringqvist E, et al. Among authors: soderbom f. Int J Parasitol. 2011 Mar;41(3-4):277-85. doi: 10.1016/j.ijpara.2010.09.011. Epub 2010 Nov 11. Int J Parasitol. 2011. PMID: 21074536

4

Global characterization of the Dicer-like protein DrnB roles in miRNA biogenesis in the social amoeba Dictyostelium discoideum.

Liao Z, Kjellin J, Hoeppner MP, Grabherr M, Söderbom F. Liao Z, et al. Among authors: soderbom f. RNA Biol. 2018;15(7):937-954. doi: 10.1080/15476286.2018.1481697. Epub 2018 Aug 21. RNA Biol. 2018. Update in: RNA Biol. 2018;15(7):iii. doi: 10.1080/15476286.2018.1525144 PMID: 29966484 Free PMC article. Updated.

5

Abundantly expressed class of noncoding RNAs conserved through the multicellular evolution of dictyostelid social amoebas.

Kjellin J, Avesson L, Reimegård J, Liao Z, Eichinger L, Noegel A, Glöckner G, Schaap P, Söderbom F. Kjellin J, et al. Among authors: soderbom f. Genome Res. 2021 Mar;31(3):436-447. doi: 10.1101/gr.272856.120. Epub 2021 Jan 21. Genome Res. 2021. PMID: 33479022 Free PMC article.

6

Saturation mutagenesis charts the functional landscape of Salmonella ProQ and reveals a gene regulatory function of its C-terminal domain.

Rizvanovic A, Kjellin J, Söderbom F, Holmqvist E. Rizvanovic A, et al. Among authors: soderbom f. Nucleic Acids Res. 2021 Sep 27;49(17):9992-10006. doi: 10.1093/nar/gkab721. Nucleic Acids Res. 2021. PMID: 34450657 Free PMC article.

7

Fractional 2'-O-methylation in the ribosomal RNA of Dictyostelium discoideum supports ribosome heterogeneity in Amoebozoa.

Diesend J, Birkedal U, Kjellin J, Zhang J, Jablonski KP, Söderbom F, Nielsen H, Hammann C. Diesend J, et al. Among authors: soderbom f. Sci Rep. 2022 Feb 4;12(1):1952. doi: 10.1038/s41598-022-05447-w. Sci Rep. 2022. PMID: 35121764 Free PMC article.

8

Evolution of microRNAs in Amoebozoa and implications for the origin of multicellularity.

Edelbroek B, Kjellin J, Biryukova I, Liao Z, Lundberg T, Noegel AA, Eichinger L, Friedländer MR, Söderbom F. Edelbroek B, et al. Among authors: soderbom f. Nucleic Acids Res. 2024 Apr 12;52(6):3121-3136. doi: 10.1093/nar/gkae109. Nucleic Acids Res. 2024. PMID: 38375870 Free PMC article.

9

ProQ-dependent activation of Salmonella virulence genes mediated by post-transcriptional control of PhoP synthesis.

Bergman S, Andresen L, Kjellin J, Martinez Burgo Y, Geiser P, Baars S, Söderbom F, Sellin ME, Holmqvist E. Bergman S, et al. Among authors: soderbom f. mSphere. 2024 Mar 26;9(3):e0001824. doi: 10.1128/msphere.00018-24. Epub 2024 Feb 27. mSphere. 2024. PMID: 38411119 Free PMC article.

10

Chromosome-level genome assembly and annotation of the social amoeba Dictyostelium firmibasis.

Edelbroek B, Kjellin J, Jerlström-Hultqvist J, Koskiniemi S, Söderbom F. Edelbroek B, et al. Among authors: soderbom f. Sci Data. 2024 Jun 22;11(1):678. doi: 10.1038/s41597-024-03513-8. Sci Data. 2024. PMID: 38909042 Free PMC article.

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