Kanduri C - Search Results

1

Transcriptional profiling of human intestinal plasma cells reveals effector functions beyond antibody production.

Snir O, Kanduri C, Lundin KEA, Sandve GK, Sollid LM. Snir O, et al. Among authors: kanduri c. United European Gastroenterol J. 2019 Dec;7(10):1399-1407. doi: 10.1177/2050640619862461. Epub 2019 Jul 3. United European Gastroenterol J. 2019. PMID: 31839965 Free PMC article.

2

Genome build information is an essential part of genomic track files.

Kanduri C, Domanska D, Hovig E, Sandve GK. Kanduri C, et al. Genome Biol. 2017 Sep 14;18(1):175. doi: 10.1186/s13059-017-1312-1. Genome Biol. 2017. PMID: 28911336 Free PMC article.

3

Coloc-stats: a unified web interface to perform colocalization analysis of genomic features.

Simovski B, Kanduri C, Gundersen S, Titov D, Domanska D, Bock C, Bossini-Castillo L, Chikina M, Favorov A, Layer RM, Mironov AA, Quinlan AR, Sheffield NC, Trynka G, Sandve GK. Simovski B, et al. Among authors: kanduri c. Nucleic Acids Res. 2018 Jul 2;46(W1):W186-W193. doi: 10.1093/nar/gky474. Nucleic Acids Res. 2018. PMID: 29873782 Free PMC article.

4

Colocalization analyses of genomic elements: approaches, recommendations and challenges.

Kanduri C, Bock C, Gundersen S, Hovig E, Sandve GK. Kanduri C, et al. Bioinformatics. 2019 May 1;35(9):1615-1624. doi: 10.1093/bioinformatics/bty835. Bioinformatics. 2019. PMID: 30307532 Free PMC article.

5

Mind the gaps: overlooking inaccessible regions confounds statistical testing in genome analysis.

Domanska D, Kanduri C, Simovski B, Sandve GK. Domanska D, et al. Among authors: kanduri c. BMC Bioinformatics. 2018 Dec 14;19(1):481. doi: 10.1186/s12859-018-2438-1. BMC Bioinformatics. 2018. PMID: 30547739 Free PMC article.

6

Distinct phenotype of CD4⁺ T cells driving celiac disease identified in multiple autoimmune conditions.

Christophersen A, Lund EG, Snir O, Solà E, Kanduri C, Dahal-Koirala S, Zühlke S, Molberg Ø, Utz PJ, Rohani-Pichavant M, Simard JF, Dekker CL, Lundin KEA, Sollid LM, Davis MM. Christophersen A, et al. Among authors: kanduri c. Nat Med. 2019 May;25(5):734-737. doi: 10.1038/s41591-019-0403-9. Epub 2019 Mar 25. Nat Med. 2019. PMID: 30911136 Free PMC article.

7

B cell tolerance and antibody production to the celiac disease autoantigen transglutaminase 2.

du Pré MF, Blazevski J, Dewan AE, Stamnaes J, Kanduri C, Sandve GK, Johannesen MK, Lindstad CB, Hnida K, Fugger L, Melino G, Qiao SW, Sollid LM. du Pré MF, et al. Among authors: kanduri c. J Exp Med. 2020 Feb 3;217(2):e20190860. doi: 10.1084/jem.20190860. J Exp Med. 2020. PMID: 31727780 Free PMC article.

8

Editorial: Genomic Colocalization and Enrichment Analyses.

Kanduri C, Sandve GK, Hovig E, De S, Layer RM. Kanduri C, et al. Front Genet. 2021 Jan 26;11:617876. doi: 10.3389/fgene.2020.617876. eCollection 2020. Front Genet. 2021. PMID: 33574832 Free PMC article. No abstract available.

9

Profiling the baseline performance and limits of machine learning models for adaptive immune receptor repertoire classification.

Kanduri C, Pavlović M, Scheffer L, Motwani K, Chernigovskaya M, Greiff V, Sandve GK. Kanduri C, et al. Gigascience. 2022 May 25;11:giac046. doi: 10.1093/gigascience/giac046. Gigascience. 2022. PMID: 35639633 Free PMC article.

10

simAIRR: simulation of adaptive immune repertoires with realistic receptor sequence sharing for benchmarking of immune state prediction methods.

Kanduri C, Scheffer L, Pavlović M, Rand KD, Chernigovskaya M, Pirvandy O, Yaari G, Greiff V, Sandve GK. Kanduri C, et al. Gigascience. 2022 Dec 28;12:giad074. doi: 10.1093/gigascience/giad074. Epub 2023 Oct 17. Gigascience. 2022. PMID: 37848619 Free PMC article.

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