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Normalization and noise reduction for single cell RNA-seq experiments.
Ding B, Zheng L, Zhu Y, Li N, Jia H, Ai R, Wildberg A, Wang W. Ding B, et al. Among authors: ai r. Bioinformatics. 2015 Jul 1;31(13):2225-7. doi: 10.1093/bioinformatics/btv122. Epub 2015 Feb 24. Bioinformatics. 2015. PMID: 25717193 Free PMC article.
Abnormal PTPN11 enhancer methylation promotes rheumatoid arthritis fibroblast-like synoviocyte aggressiveness and joint inflammation.
Maeshima K, Stanford SM, Hammaker D, Sacchetti C, Zeng LF, Ai R, Zhang V, Boyle DL, Aleman Muench GR, Feng GS, Whitaker JW, Zhang ZY, Wang W, Bottini N, Firestein GS. Maeshima K, et al. Among authors: ai r. JCI Insight. 2016 May 19;1(7):e86580. doi: 10.1172/jci.insight.86580. JCI Insight. 2016. PMID: 27275015 Free PMC article.
Neuronal subtypes and diversity revealed by single-nucleus RNA sequencing of the human brain.
Lake BB, Ai R, Kaeser GE, Salathia NS, Yung YC, Liu R, Wildberg A, Gao D, Fung HL, Chen S, Vijayaraghavan R, Wong J, Chen A, Sheng X, Kaper F, Shen R, Ronaghi M, Fan JB, Wang W, Chun J, Zhang K. Lake BB, et al. Among authors: ai r. Science. 2016 Jun 24;352(6293):1586-90. doi: 10.1126/science.aaf1204. Science. 2016. PMID: 27339989 Free PMC article.
Comprehensive epigenetic landscape of rheumatoid arthritis fibroblast-like synoviocytes.
Ai R, Laragione T, Hammaker D, Boyle DL, Wildberg A, Maeshima K, Palescandolo E, Krishna V, Pocalyko D, Whitaker JW, Bai Y, Nagpal S, Bachman KE, Ainsworth RI, Wang M, Ding B, Gulko PS, Wang W, Firestein GS. Ai R, et al. Nat Commun. 2018 May 15;9(1):1921. doi: 10.1038/s41467-018-04310-9. Nat Commun. 2018. PMID: 29765031 Free PMC article.
Bayesian Networks Predict Neuronal Transdifferentiation.
Ainsworth RI, Ai R, Ding B, Li N, Zhang K, Wang W. Ainsworth RI, et al. Among authors: ai r. G3 (Bethesda). 2018 Jul 2;8(7):2501-2511. doi: 10.1534/g3.118.200401. G3 (Bethesda). 2018. PMID: 29848620 Free PMC article.
153 results