Stirzaker C - Search Results

1

Constitutively bound CTCF sites maintain 3D chromatin architecture and long-range epigenetically regulated domains.

Khoury A, Achinger-Kawecka J, Bert SA, Smith GC, French HJ, Luu PL, Peters TJ, Du Q, Parry AJ, Valdes-Mora F, Taberlay PC, Stirzaker C, Statham AL, Clark SJ. Khoury A, et al. Among authors: stirzaker c. Nat Commun. 2020 Jan 7;11(1):54. doi: 10.1038/s41467-019-13753-7. Nat Commun. 2020. PMID: 31911579 Free PMC article.

2

Extensive DNA methylation spanning the Rb promoter in retinoblastoma tumors.

Stirzaker C, Millar DS, Paul CL, Warnecke PM, Harrison J, Vincent PC, Frommer M, Clark SJ. Stirzaker C, et al. Cancer Res. 1997 Jun 1;57(11):2229-37. Cancer Res. 1997. PMID: 9187126

3

Cytosines adjacent to methylated CpG sites can be partially resistant to conversion in genomic bisulfite sequencing leading to methylation artifacts.

Harrison J, Stirzaker C, Clark SJ. Harrison J, et al. Among authors: stirzaker c. Anal Biochem. 1998 Nov 1;264(1):129-32. doi: 10.1006/abio.1998.2833. Anal Biochem. 1998. PMID: 9784198 No abstract available.

4

Hypermethylation trigger of the glutathione-S-transferase gene (GSTP1) in prostate cancer cells.

Song JZ, Stirzaker C, Harrison J, Melki JR, Clark SJ. Song JZ, et al. Among authors: stirzaker c. Oncogene. 2002 Feb 7;21(7):1048-61. doi: 10.1038/sj.onc.1205153. Oncogene. 2002. PMID: 11850822

5

Identification and resolution of artifacts in bisulfite sequencing.

Warnecke PM, Stirzaker C, Song J, Grunau C, Melki JR, Clark SJ. Warnecke PM, et al. Among authors: stirzaker c. Methods. 2002 Jun;27(2):101-7. doi: 10.1016/s1046-2023(02)00060-9. Methods. 2002. PMID: 12095266

6

Transcriptional gene silencing promotes DNA hypermethylation through a sequential change in chromatin modifications in cancer cells.

Stirzaker C, Song JZ, Davidson B, Clark SJ. Stirzaker C, et al. Cancer Res. 2004 Jun 1;64(11):3871-7. doi: 10.1158/0008-5472.CAN-03-3690. Cancer Res. 2004. PMID: 15172996

7

Epigenetic remodeling in colorectal cancer results in coordinate gene suppression across an entire chromosome band.

Frigola J, Song J, Stirzaker C, Hinshelwood RA, Peinado MA, Clark SJ. Frigola J, et al. Among authors: stirzaker c. Nat Genet. 2006 May;38(5):540-9. doi: 10.1038/ng1781. Epub 2006 Apr 23. Nat Genet. 2006. PMID: 16642018

8

DNA methylation: bisulphite modification and analysis.

Clark SJ, Statham A, Stirzaker C, Molloy PL, Frommer M. Clark SJ, et al. Among authors: stirzaker c. Nat Protoc. 2006;1(5):2353-64. doi: 10.1038/nprot.2006.324. Nat Protoc. 2006. PMID: 17406479

9

Concordant epigenetic silencing of transforming growth factor-beta signaling pathway genes occurs early in breast carcinogenesis.

Hinshelwood RA, Huschtscha LI, Melki J, Stirzaker C, Abdipranoto A, Vissel B, Ravasi T, Wells CA, Hume DA, Reddel RR, Clark SJ. Hinshelwood RA, et al. Among authors: stirzaker c. Cancer Res. 2007 Dec 15;67(24):11517-27. doi: 10.1158/0008-5472.CAN-07-1284. Cancer Res. 2007. PMID: 18089780

10

Aberrant de novo methylation of the p16INK4A CpG island is initiated post gene silencing in association with chromatin remodelling and mimics nucleosome positioning.

Hinshelwood RA, Melki JR, Huschtscha LI, Paul C, Song JZ, Stirzaker C, Reddel RR, Clark SJ. Hinshelwood RA, et al. Among authors: stirzaker c. Hum Mol Genet. 2009 Aug 15;18(16):3098-109. doi: 10.1093/hmg/ddp251. Epub 2009 May 28. Hum Mol Genet. 2009. PMID: 19477956

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