Jin S - Search Results

1

scAI: an unsupervised approach for the integrative analysis of parallel single-cell transcriptomic and epigenomic profiles.

Jin S, Zhang L, Nie Q. Jin S, et al. Genome Biol. 2020 Feb 3;21(1):25. doi: 10.1186/s13059-020-1932-8. Genome Biol. 2020. PMID: 32014031 Free PMC article.

2

scEpath: energy landscape-based inference of transition probabilities and cellular trajectories from single-cell transcriptomic data.

Jin S, MacLean AL, Peng T, Nie Q. Jin S, et al. Bioinformatics. 2018 Jun 15;34(12):2077-2086. doi: 10.1093/bioinformatics/bty058. Bioinformatics. 2018. PMID: 29415263 Free PMC article.

3

Single-cell analysis reveals fibroblast heterogeneity and myeloid-derived adipocyte progenitors in murine skin wounds.

Guerrero-Juarez CF, Dedhia PH, Jin S, Ruiz-Vega R, Ma D, Liu Y, Yamaga K, Shestova O, Gay DL, Yang Z, Kessenbrock K, Nie Q, Pear WS, Cotsarelis G, Plikus MV. Guerrero-Juarez CF, et al. Among authors: jin s. Nat Commun. 2019 Feb 8;10(1):650. doi: 10.1038/s41467-018-08247-x. Nat Commun. 2019. PMID: 30737373 Free PMC article.

4

scRCMF: Identification of Cell Subpopulations and Transition States From Single-Cell Transcriptomes.

Zheng X, Jin S, Nie Q, Zou X. Zheng X, et al. Among authors: jin s. IEEE Trans Biomed Eng. 2020 May;67(5):1418-1428. doi: 10.1109/TBME.2019.2937228. Epub 2019 Aug 23. IEEE Trans Biomed Eng. 2020. PMID: 31449003 Free PMC article.

5

CA1-projecting subiculum neurons facilitate object-place learning.

Sun Y, Jin S, Lin X, Chen L, Qiao X, Jiang L, Zhou P, Johnston KG, Golshani P, Nie Q, Holmes TC, Nitz DA, Xu X. Sun Y, et al. Among authors: jin s. Nat Neurosci. 2019 Nov;22(11):1857-1870. doi: 10.1038/s41593-019-0496-y. Epub 2019 Sep 23. Nat Neurosci. 2019. PMID: 31548723 Free PMC article.

6

Circadian control of interferon-sensitive gene expression in murine skin.

Greenberg EN, Marshall ME, Jin S, Venkatesh S, Dragan M, Tsoi LC, Gudjonsson JE, Nie Q, Takahashi JS, Andersen B. Greenberg EN, et al. Among authors: jin s. Proc Natl Acad Sci U S A. 2020 Mar 17;117(11):5761-5771. doi: 10.1073/pnas.1915773117. Epub 2020 Mar 4. Proc Natl Acad Sci U S A. 2020. PMID: 32132203 Free PMC article.

7

Defining Epidermal Basal Cell States during Skin Homeostasis and Wound Healing Using Single-Cell Transcriptomics.

Haensel D, Jin S, Sun P, Cinco R, Dragan M, Nguyen Q, Cang Z, Gong Y, Vu R, MacLean AL, Kessenbrock K, Gratton E, Nie Q, Dai X. Haensel D, et al. Among authors: jin s. Cell Rep. 2020 Mar 17;30(11):3932-3947.e6. doi: 10.1016/j.celrep.2020.02.091. Cell Rep. 2020. PMID: 32187560 Free PMC article.

8

Murine interfollicular epidermal differentiation is gradualistic with GRHL3 controlling progression from stem to transition cell states.

Lin Z, Jin S, Chen J, Li Z, Lin Z, Tang L, Nie Q, Andersen B. Lin Z, et al. Among authors: jin s. Nat Commun. 2020 Oct 28;11(1):5434. doi: 10.1038/s41467-020-19234-6. Nat Commun. 2020. PMID: 33116143 Free PMC article.

9

Inference and analysis of cell-cell communication using CellChat.

Jin S, Guerrero-Juarez CF, Zhang L, Chang I, Ramos R, Kuan CH, Myung P, Plikus MV, Nie Q. Jin S, et al. Nat Commun. 2021 Feb 17;12(1):1088. doi: 10.1038/s41467-021-21246-9. Nat Commun. 2021. PMID: 33597522 Free PMC article.

10

The landscape of cell-cell communication through single-cell transcriptomics.

Almet AA, Cang Z, Jin S, Nie Q. Almet AA, et al. Among authors: jin s. Curr Opin Syst Biol. 2021 Jun;26:12-23. doi: 10.1016/j.coisb.2021.03.007. Epub 2021 Mar 26. Curr Opin Syst Biol. 2021. PMID: 33969247 Free PMC article.

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