Shkolnisky Y - Search Results

1

KLT picker: Particle picking using data-driven optimal templates.

Eldar A, Landa B, Shkolnisky Y. Eldar A, et al. Among authors: shkolnisky y. J Struct Biol. 2020 May 1;210(2):107473. doi: 10.1016/j.jsb.2020.107473. Epub 2020 Feb 7. J Struct Biol. 2020. PMID: 32035993

2

Detecting consistent common lines in cryo-EM by voting.

Singer A, Coifman RR, Sigworth FJ, Chester DW, Shkolnisky Y. Singer A, et al. Among authors: shkolnisky y. J Struct Biol. 2010 Mar;169(3):312-22. doi: 10.1016/j.jsb.2009.11.003. Epub 2009 Nov 17. J Struct Biol. 2010. PMID: 19925867 Free PMC article.

3

Common lines modeling for reference free Ab-initio reconstruction in cryo-EM.

Greenberg I, Shkolnisky Y. Greenberg I, et al. Among authors: shkolnisky y. J Struct Biol. 2017 Nov;200(2):106-117. doi: 10.1016/j.jsb.2017.09.007. Epub 2017 Sep 21. J Struct Biol. 2017. PMID: 28943480

4

Steerable Principal Components for Space-Frequency Localized Images.

Landa B, Shkolnisky Y. Landa B, et al. Among authors: shkolnisky y. SIAM J Imaging Sci. 2017;10(2):508-534. doi: 10.1137/16M1085334. Epub 2017 Apr 13. SIAM J Imaging Sci. 2017. PMID: 29081879 Free PMC article.

5

ASOCEM: Automatic Segmentation Of Contaminations in cryo-EM.

Eldar A, Amos I, Shkolnisky Y. Eldar A, et al. Among authors: shkolnisky y. J Struct Biol. 2022 Sep;214(3):107871. doi: 10.1016/j.jsb.2022.107871. Epub 2022 May 21. J Struct Biol. 2022. PMID: 35609785

6

A clustering approach to multireference alignment of single-particle projections in electron microscopy.

Sorzano CO, Bilbao-Castro JR, Shkolnisky Y, Alcorlo M, Melero R, Caffarena-Fernández G, Li M, Xu G, Marabini R, Carazo JM. Sorzano CO, et al. Among authors: shkolnisky y. J Struct Biol. 2010 Aug;171(2):197-206. doi: 10.1016/j.jsb.2010.03.011. Epub 2010 Mar 31. J Struct Biol. 2010. PMID: 20362059 Free PMC article.

7

The structure of a triple complex of plant photosystem I with ferredoxin and plastocyanin.

Caspy I, Borovikova-Sheinker A, Klaiman D, Shkolnisky Y, Nelson N. Caspy I, et al. Among authors: shkolnisky y. Nat Plants. 2020 Oct;6(10):1300-1305. doi: 10.1038/s41477-020-00779-9. Epub 2020 Oct 5. Nat Plants. 2020. PMID: 33020607

8

A pattern matching approach to the automatic selection of particles from low-contrast electron micrographs.

Abrishami V, Zaldívar-Peraza A, de la Rosa-Trevín JM, Vargas J, Otón J, Marabini R, Shkolnisky Y, Carazo JM, Sorzano CO. Abrishami V, et al. Among authors: shkolnisky y. Bioinformatics. 2013 Oct 1;29(19):2460-8. doi: 10.1093/bioinformatics/btt429. Epub 2013 Aug 19. Bioinformatics. 2013. PMID: 23958728

9

Three-dimensional alignment of density maps in cryo-electron microscopy.

Harpaz Y, Shkolnisky Y. Harpaz Y, et al. Among authors: shkolnisky y. Biol Imaging. 2023 Mar 10;3:e8. doi: 10.1017/S2633903X23000089. eCollection 2023. Biol Imaging. 2023. PMID: 38487687 Free PMC article.

10

Accelerating x-ray data collection using pyramid beam ray casting geometries.

Averbuch A, Lifschitz G, Shkolnisky Y. Averbuch A, et al. Among authors: shkolnisky y. IEEE Trans Image Process. 2011 Feb;20(2):523-33. doi: 10.1109/TIP.2010.2064328. Epub 2010 Aug 5. IEEE Trans Image Process. 2011. PMID: 20693110

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